DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Ubc6 and ube2r2

Sequence 1:NP_001246916.1 Gene:Ubc6 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001002600.1 Gene:ube2r2 ZFINID:ZDB-GENE-040718-344 Length:250 Species:Danio rerio

Alignment Length:167 Identity:59/168 (35%)
Similarity:95/168 (57%) Gaps:20/168 (12%)


  Fly     5 ARRRLMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPP 68
            :::.||.:.|.|||:|..|.. ....::::..|...||||.:|.:|.|.||..|:|..:||..||
Zfish     9 SQKALMLELKSLQEEPVEGFRITLVEESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPP 73

  Fly    69 TVRFVSKVFHPNVYADGGICLDIL-------------QNRWSPTYDVSAILTSIQSLLSDPNPNS 120
            |.||::|::|||:|.:|.:|:.||             ..||:||.:|..||.|:.|||::||..|
Zfish    74 TFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFS 138

  Fly   121 PANSTAAQLYKENR------REYEKRVKACVEQSFID 151
            |||..|:.::::.|      :||.:.::..|..:..|
Zfish   139 PANVDASVMFRKWRDSKGKDKEYAEIIRKQVVSTKAD 175

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:306648 57/157 (36%)
ube2r2NP_001002600.1 COG5078 7..169 CDD:227410 57/160 (36%)
UBCc 11..169 CDD:238117 57/158 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5078
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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