DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Ubc6 and ube2l3b

Sequence 1:NP_001246916.1 Gene:Ubc6 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001076266.1 Gene:ube2l3b ZFINID:ZDB-GENE-030131-662 Length:190 Species:Danio rerio

Alignment Length:138 Identity:41/139 (29%)
Similarity:77/139 (55%) Gaps:12/139 (9%)


  Fly     6 RRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTV 70
            |:..|::|:.:|.|          ::||:.|..:|. |.:.|::.|.|::.|.|..|||.|||.:
Zfish    51 RKSGMKNFRNIQVD----------ESNILTWQGLIV-PDNPPYDKGAFRIEIIFPAEYPFKPPKI 104

  Fly    71 RFVSKVFHPNVYADGGICLDILQ-NRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENR 134
            .|.:|::|||:...|.:||.::. ..|.|......::.|:.:|::||.|..|..:..|:.|.::|
Zfish   105 TFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDR 169

  Fly   135 REYEKRVK 142
            :::.|..:
Zfish   170 KKFFKNAE 177

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:306648 40/137 (29%)
ube2l3bNP_001076266.1 COG5078 44..186 CDD:227410 41/139 (29%)
UBCc 46..185 CDD:214562 41/139 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5078
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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