DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubc6 and rhp6

DIOPT Version :10

Sequence 1:NP_524230.2 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_592876.1 Gene:rhp6 / 2542622 PomBaseID:SPAC18B11.07C Length:151 Species:Schizosaccharomyces pombe


Alignment Length:149 Identity:107/149 - (71%)
Similarity:129/149 - (86%) Gaps:0/149 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPN 65
            |||.|||||||||||:|:|||.|||.:|..:|:|:|||||.||.|||||||||||.:.|.|:|||
pombe     1 MSTTARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPN 65

  Fly    66 KPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLY 130
            |||.|:|||.:|||||||:|.:|||||||||||||||:||||||||||:|||..||||:.||||:
pombe    66 KPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQLH 130

  Fly   131 KENRREYEKRVKACVEQSF 149
            :||::||.:||:..||.|:
pombe   131 RENKKEYVRRVRKTVEDSW 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_524230.2 UBCc_UBE2A_2B 3..145 CDD:467410 102/141 (72%)
rhp6NP_592876.1 UBCc_UBE2A_2B 3..145 CDD:467410 102/141 (72%)

Return to query results.
Submit another query.