DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: Ubc6 and Ube2e2

Sequence 1:NP_001246916.1 Gene:Ubc6 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:XP_017171445.1 Gene:Ube2e2 MGIID:2384997 Length:239 Species:Mus musculus

Alignment Length:156 Identity:56/157 (36%)
Similarity:85/157 (54%) Gaps:15/157 (10%)


  Fly     1 MSTPARRRLMRDFKRLQEDP--------------PTGVSGAPTDNNIMIWNAVIFGPHDTPFEDG 51
            :||.| :|:.::...:..||              |..:|..|..:||..|.:.|.||..:.:|.|
Mouse    77 LSTSA-KRIQKELAEITLDPPPNCRHMFYDSKWVPEALSAGPKGDNIYEWRSTILGPPGSVYEGG 140

  Fly    52 TFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDP 116
            .|.|.|.|:.:||.|||.|.|.::::|.|:.:.|.||||||::.|||...:|.:|.||.|||:|.
Mouse   141 VFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC 205

  Fly   117 NPNSPANSTAAQLYKENRREYEKRVK 142
            ||..|...:.|..|..||.|:::..:
Mouse   206 NPADPLVGSIATQYMTNRAEHDRMAR 231

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:306648 53/150 (35%)
Ube2e2XP_017171445.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5078
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.