DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Ubc6 and ubc-23

Sequence 1:NP_001246916.1 Gene:Ubc6 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_509498.4 Gene:ubc-23 WormBaseID:WBGene00006718 Length:395 Species:Caenorhabditis elegans

Alignment Length:58 Identity:12/59 (20%)
Similarity:15/59 (25%) Gaps:14/59 (24%)


  Fly    44 HDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYD 101
            |..|..|.....|..|...|.        :.....|..|.      |.|:|.....:|
 Worm   116 HSQPIPDALKCYTDNFNTRYQ--------IGSTVMPKFYT------DTLRNAVKEAFD 159

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:306648 12/59 (20%)
ubc-23NP_509498.4 UBA_4 13..54 CDD:291236
UAS 125..278 CDD:214737 9/50 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5078
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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