DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubc6 and let-70

DIOPT Version :10

Sequence 1:NP_524230.2 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_502065.1 Gene:let-70 / 178006 WormBaseID:WBGene00002344 Length:147 Species:Caenorhabditis elegans


Alignment Length:135 Identity:57/135 - (42%)
Similarity:87/135 - (64%) Gaps:0/135 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPT 69
            |.:|:.::.:.|..|||...|..|..:::..|.|.|.||.::|::.|.|.|||.|..:||.|||.
 Worm     2 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPK 66

  Fly    70 VRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENR 134
            |.|.::::|||:.::|.||||||:::|||...:|.:|.||.|||.||||:.|.....|::||.:|
 Worm    67 VAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR 131

  Fly   135 REYEK 139
            ..|.:
 Worm   132 ERYNQ 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_524230.2 UBCc_UBE2A_2B 3..145 CDD:467410 57/135 (42%)
let-70NP_502065.1 UBCc_UBE2D 3..145 CDD:467412 56/134 (42%)

Return to query results.
Submit another query.