DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Ubc6 and let-70

Sequence 1:NP_001246916.1 Gene:Ubc6 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_502065.1 Gene:let-70 WormBaseID:WBGene00002344 Length:147 Species:Caenorhabditis elegans

Alignment Length:135 Identity:57/136 (42%)
Similarity:87/136 (64%) Gaps:0/136 (0%)


  Fly     5 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPT 69
            |.:|:.::.:.|..|||...|..|..:::..|.|.|.||.::|::.|.|.|||.|..:||.|||.
 Worm     2 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPK 66

  Fly    70 VRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENR 134
            |.|.::::|||:.::|.||||||:::|||...:|.:|.||.|||.||||:.|.....|::||.:|
 Worm    67 VAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR 131

  Fly   135 REYEK 139
            ..|.:
 Worm   132 ERYNQ 136

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:306648 56/133 (42%)
let-70NP_502065.1 UBCc 1..146 CDD:320784 57/136 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5078
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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