DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Ubc6 and ube2d4

Sequence 1:NP_001246916.1 Gene:Ubc6 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:XP_012814892.1 Gene:ube2d4 XenbaseID:XB-GENE-962537 Length:159 Species:Xenopus tropicalis

Alignment Length:124 Identity:60/125 (48%)
Similarity:80/125 (64%) Gaps:0/125 (0%)


  Fly    16 LQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPN 80
            ||.|||...|..|...::..|.|.|.||:|:||:.|.|.|||.|..:||.|||.|.|.:|::|||
 Frog    25 LQRDPPAQCSAGPVGEDLFHWQATIMGPNDSPFQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPN 89

  Fly    81 VYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEK 139
            :.::|.||||||:::|||...||.:|.||.|||.||||:.|.....|..||.:|.:|.:
 Frog    90 INSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNR 148

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:306648 60/125 (48%)
ube2d4XP_012814892.1 COG5078 21..159 CDD:227410 60/125 (48%)
UBCc 21..158 CDD:294101 60/125 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5078
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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