DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and ube2d4

DIOPT Version :10

Sequence 1:NP_524230.2 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:XP_012814892.1 Gene:ube2d4 / 100497147 XenbaseID:XB-GENE-962537 Length:159 Species:Xenopus tropicalis


Alignment Length:124 Identity:60/124 - (48%)
Similarity:80/124 - (64%) Gaps:0/124 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPN 80
            ||.|||...|..|...::..|.|.|.||:|:||:.|.|.|||.|..:||.|||.|.|.:|::|||
 Frog    25 LQRDPPAQCSAGPVGEDLFHWQATIMGPNDSPFQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPN 89

  Fly    81 VYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEK 139
            :.::|.||||||:::|||...||.:|.||.|||.||||:.|.....|..||.:|.:|.:
 Frog    90 INSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNR 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_524230.2 UBCc_UBE2A_2B 3..145 CDD:467410 60/124 (48%)
ube2d4XP_012814892.1 UBCc_UBE2D 21..157 CDD:467412 60/124 (48%)

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