DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Ubc6 and ube2c

Sequence 1:NP_001246916.1 Gene:Ubc6 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001095283.1 Gene:ube2c XenbaseID:XB-GENE-971108 Length:179 Species:Xenopus tropicalis

Alignment Length:143 Identity:61/144 (42%)
Similarity:85/144 (59%) Gaps:7/144 (5%)


  Fly     7 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVR 71
            :||.::...|......|:|..|..:|:..|...|.|...|.:|...:||::||...||...|||:
 Frog    33 KRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYESLRYKLSLEFPSGYPYNAPTVK 97

  Fly    72 FVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQL------Y 130
            ||:..|||||.:.|.||||||:::||..|||..||.|:||||.:||..||.|..||:|      |
 Frog    98 FVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQNQTAY 162

  Fly   131 KENRRE-YEKRVK 142
            |::..| |:|:|:
 Frog   163 KKHLHEQYQKQVR 175

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:306648 61/143 (43%)
ube2cNP_001095283.1 UQ_con 34..170 CDD:306648 58/136 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5078
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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