DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF3a and eif3a

DIOPT Version :10

Sequence 1:NP_649470.2 Gene:eIF3a / 40563 FlyBaseID:FBgn0037249 Length:1140 Species:Drosophila melanogaster
Sequence 2:NP_001096173.1 Gene:eif3a / 100124719 XenbaseID:XB-GENE-994394 Length:1391 Species:Xenopus tropicalis


Alignment Length:1307 Identity:561/1307 - (42%)
Similarity:757/1307 - (57%) Gaps:187/1307 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARYTQRPENALKRANEFIEVGKPLRALDTLQEVFRNKR---WNYAYSETVIEPLMFKYLYLCVE 62
            |..|.|||||||||||||:||||...|||.|.:|.::|:   |     :.:.||:|.|||.|||:
 Frog     1 MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVIKSKKHRTW-----QKIHEPIMLKYLELCVD 60

  Fly    63 LKKSHIAKEGLFQYRNMFQLVNVNSLENVIRGYLKMAEEHTEAAQAQSSAAVAVLELDDLDNIAT 127
            |:|||:|||||:||:|:.|.||:.|||:|:|.|||:|||.|||  |:.|:...||:::|||||.|
 Frog    61 LRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKLAEERTEA--AKESSQQMVLDIEDLDNIQT 123

  Fly   128 PESILMSAVCGEDAQDRSDRTILLPWVKFLWESYCQCLELLRVNTHCEALYHDIARMAFQFCLKY 192
            |||:|:|||.|||.|||:||.:|.||||||||||.|||:|||.|:..|.||||||:.||:|||.|
 Frog   124 PESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSKVERLYHDIAQQAFKFCLLY 188

  Fly   193 NRKSEFRRLCDKLRKHLEDICKSSNQTTGVSINKVETQQLCLDTRLYLLDSAIQMELWQEAYKAI 257
            .||:|||:|||.||.||..|.:..||:|.:::|..|:|.:.|:|||..|||||.|||||||:||:
 Frog   189 TRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSAISMELWQEAFKAV 253

  Fly   258 EDIHGLMALSKKTPVPKTMANYYQKLAMVFSKAGNQLFHAAALLKLFQLTRELKKNLTKDDLQRM 322
            ||||||.|||||.|.|:.|||||.|::.||.|:||.||||:.|.:|:.|:||::||||::::|||
 Frog   254 EDIHGLFALSKKPPKPQLMANYYNKVSTVFWKSGNTLFHASTLHRLYHLSREMRKNLTQEEMQRM 318

  Fly   323 AAHVLLATLSIPLPSAHPEFDRFIEADKSPLEKAQKLAVLLGLPQPPTRVSLIREVVRLNVPQLV 387
            :..|||||||||:.....:..|.::.|...|||.::||.||||..|||||.||.::||.|:.|.|
 Frog   319 STRVLLATLSIPITPERTDIARLLDMDGIILEKQRRLATLLGLQAPPTRVGLINDMVRFNMLQYV 383

  Fly   388 SEDFRNLYNWLEVDFNPLNLCKRIQSIVDFI----ENGPENALLTPYIQSLKDVTIMRLIRQISQ 448
            ..:.:.||||||:||:||.||.|:..::|::    |..||   |..|:..|:..||:||::|::|
 Frog   384 VPEVKELYNWLEMDFHPLKLCTRVTKVLDWVKEQAEKEPE---LQQYVPQLQSNTILRLLQQVAQ 445

  Fly   449 VYESIKFQRLLQLASFCNIFELEKLLVESVRHNDMQIRIDHQKNSIYFGTDLTESQREYRPDGPA 513
            :|::|:|.||..|..|.:.|.||:.:|::.||.|:|:||||...::.||:||..|.||..|.||.
 Frog   446 LYQTIEFSRLASLVPFVDAFLLERAIVDAARHCDLQVRIDHSSRTLSFGSDLNYSTREDAPFGPF 510

  Fly   514 LQSMPSEQIRSQLVNMSTVLTRAVSIVYPNRERDQRAKLRNQMVNHYHEIKDREHQRILQRQKII 578
            ||:|||||||:||..||.||::||..:.|.....::.:.....:..|.:...:||||||.|::.|
 Frog   511 LQNMPSEQIRNQLTAMSCVLSKAVGAIKPAHVLQEKEEQHQIAITAYQKNSRKEHQRILARRQTI 575

  Fly   579 EDRKEYIEKQNNAREEEEARRQEEESRKAKLAEQKRLEQEQEERERKRHQNEIQAIREKSLKEKV 643
            |:|||.:|..|..||:||..::|.|.:|.:.||::||.||.:|||::|...|.:.|::|:::|::
 Frog   576 EERKERLENLNIQREKEEMEQKEAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERL 640

  Fly   644 QQISQTAHGKKMLSKLDEEGIKKLDAEQIAKRESEELQREAKELQSKLKSQEKKIDYFERAKRLE 708
            :||.:|..|.|....:|.|.:::||.:.|..::.|:|::|.||||.:||:|||||||||||||||
 Frog   641 EQIKKTELGAKAFKDIDIENLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLE 705

  Fly   709 EIPLFEKYLAEKQVKDKEFWEATEKTRIENAIAERKDAVAQQERLKRMYPDRDEFLEALKKERAS 773
            ||||.:|...|:::.|.|.||..|:.||...:.||:.||..:.|:.||..|::.|:..||..|.|
 Frog   706 EIPLLKKAYEEQRINDMELWELQEEERISTLLLEREKAVEHKNRMSRMVEDKELFVSKLKASRQS 770

  Fly   774 LYVEKLKKFEAALEAERKKRLADRIIRRREERRQAFLREKEEERLRKEEEIRLAQAAEERAAAEA 838
            ||..|||:|:..|..|:..||.:|...|:||||..:.|:||||..|..|| :|.|..||:...|.
 Frog   771 LYEAKLKQFQERLAEEKAARLEERKRERKEERRVNYYRDKEEEEERLREE-QLKQEREEQEKVEN 834

  Fly   839 RRLEREAED-----EKRRAQYEKQRAKE---EEAERKIKEDR---DRLSRELAS----------- 881
            .:.|.|..|     :|...|..|:|.:|   ||.|||.:|:|   |...|:.:|           
 Frog   835 EKREAEQRDYQERLKKLEEQERKKRQRELEIEERERKREEERRGGDDTFRKDSSRWGEREESGWR 899

  Fly   882 ------ERERTEKDRDTWRPRGG--DRP----SASN----------------------------- 905
                  ||::...:|| || |||  .:|    .|||                             
 Frog   900 RGADPDERKQVPPERD-WR-RGGPDSKPVINEDASNREEDENAALRKDEEQVSSRAFEEKVSLPD 962

  Fly   906 -----GGSSEWR--RAAPAASERNDRGGER-IERGGERIERGGERLERGGER-IE---------- 951
                 |||  ||  ...|......|||..| |:..|.|  ||.|. :||..| ||          
 Frog   963 ADEEKGGS--WRDEDRGPKRGLEEDRGPRRGIDDAGPR--RGFEE-DRGPRRGIEDDRAPRRGFD 1022

  Fly   952 ----------------RGGDRDRKDNEGADSSWRVRREPDSQRAAAPK-----DSGAPQSRDDKW 995
                            ||.|.||....|.|.....||..|..|  .|:     |.|..:..||..
 Frog  1023 DDRGPRRGFDDDRGPRRGFDEDRGPRRGIDDDRGPRRGFDEDR--TPRRGFDDDRGPRRGFDDDR 1085

  Fly   996 --RRGGERD----RDFRID-GARR----DR--------DDGPRR----DR--------DDGPRRD 1029
              |||.:.|    |.|..| |.||    ||        |.||||    ||        |.||||.
 Frog  1086 GPRRGFDEDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRG 1150

  Fly  1030 RDDERG---GFRRADGARR-TDE-------------PQR---ETGGNWR---DAPRHADRETRRP 1071
            .|::||   ||....|.|| .||             |:|   |..|:||   |.||....:.|.|
 Frog  1151 FDEDRGPRRGFEDDRGPRRGFDEDRTPRRGFDDDRGPRRGLDEDRGSWRGGDDVPRRGADDDRGP 1215

  Fly  1072 AERRDRDVRETRGDQRGSAPKEAASGGVGGNWRTAPATREEKPAAKRD-QAQEKE--NKAGDDGE 1133
            ....|.|....||:.|...|.:..:....|.||.....||:.....|| ||.|:.  ::.|:|.|
 Frog  1216 RRGADDDRGPRRGEDRDQTPWKPMAASRPGGWREREKAREDSWGPPRDSQAPEEREWSRQGEDSE 1280

  Fly  1134 WTSVKRR 1140
            ..|.:.|
 Frog  1281 KDSERDR 1287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3aNP_649470.2 PINT 429..>497 CDD:214509 27/67 (40%)
PTZ00121 <553..1128 CDD:173412 254/734 (35%)
PRK12678 847..>1006 CDD:237171 71/267 (27%)
eif3aNP_001096173.1 PINT 426..498 CDD:214509 30/71 (42%)
PTZ00121 <530..858 CDD:173412 134/328 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 809..1391 146/489 (30%)
PRK12678 911..>1144 CDD:237171 67/241 (28%)
26 X 10 AA approximate tandem repeats of [DE]-[DE]-[DE]-R-[GATV]-[PS]-[KRW]-R-G-[AEFGIL] 973..1229 80/260 (31%)
PRK12678 1055..>1271 CDD:237171 70/217 (32%)
PHA03307 1184..>1376 CDD:223039 32/104 (31%)

Return to query results.
Submit another query.