DRSC/TRiP Functional Genomics Resources

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Protein Alignment BoYb and AT1G20920

DIOPT Version :10

Sequence 1:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_173516.1 Gene:AT1G20920 / 838685 AraportID:AT1G20920 Length:1166 Species:Arabidopsis thaliana


Alignment Length:451 Identity:87/451 - (19%)
Similarity:175/451 - (38%) Gaps:75/451 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RPVRRFAEVSLLPDILETMRNLGLNRLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAYIPPVC 115
            ||::.:.:..|...||:||:.|...:.:.:|:...|.:.  ||...:.|....||:|..::.|: 
plant   526 RPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIM--SGRDCIGVAKTGSGKTLGFVLPM- 587

  Fly   116 HAVSRALMDFTGQCEDVEHDISQP-----DRYGPIALILVPDLRRVHQVSAMCLALLRKAHKNDS 175
                            :.|...||     |  |||.|::.|....|.|:.:.    :||..|...
plant   588 ----------------LRHIKDQPPVEAGD--GPIGLVMAPTRELVQQIHSD----IRKFSKPLG 630

  Fly   176 VTLALNVSSTKSSQFFLKLLNGVGCLVATPAQLVWFWQEAPG-LMRFPCLQFLVYDDVDLMSREQ 239
            :........:..:|...:|..|...:|.||.:::.....:.| :.....:.|||.|:.|.|....
plant   631 IRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMG 695

  Fly   240 LQ-DVQQVLQEILPLSHSPQVVMVSKSYCHTLMSKLRAVNDKP--------ALVFGDILEAALYG 295
            .: .:.:::|.|.|   ..|.|:.|.::...:.:..|.|.:||        ::|..||.:.    
plant   696 FEPQITRIIQNIRP---ERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQL---- 753

  Fly   296 GTRIRISIMRSEAKANAVVQMLQQCSPEEFRTVIFCSDDGDMQCLVAALEVQHYSCLPYYQTADL 360
                 :.:.....:...::::|.:.| |:.:.::|.........|...:....|.||..:...|.
plant   754 -----VEVRPESDRFLRLLELLGEWS-EKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQ 812

  Fly   361 EVRQQVHSWQARSNGVILLCTDNCPE-LDIRDAHTIIHHSMSHSWSKFKLRHLKISDNLCNMVKP 424
            ..|:...|........:|:.|..... ||:::...:::....:.:..:..|           |..
plant   813 TDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHR-----------VGR 866

  Fly   425 TASIVKKPLYSLVLLDDNNHRQLPRLVDFLQLHQK---------VDHRLVEVAKRIRQELG 476
            |....:|.. ::..:.:::.:..|.||..|:|.::         .|..:|:|.:.|.|..|
plant   867 TGRAGRKGC-AVTFISEDDAKYAPDLVKALELSEQPVPDDLKALADGFMVKVKQGIEQAHG 926

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BoYbNP_649430.1 DEAD-like_helicase_N 104..>235 CDD:475120 30/136 (22%)
Tudor_SF 531..663 CDD:470623
PLN00203 <659..>749 CDD:215101
AT1G20920NP_173516.1 PTZ00121 <205..369 CDD:173412
DEADc_DDX46 518..739 CDD:350711 54/240 (23%)
SF2_C_DEAD 750..880 CDD:350174 20/151 (13%)
KH-I_AtRH42_like 1063..1165 CDD:411903
Blue background indicates that the domain is not in the aligned region.

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