DRSC/TRiP Functional Genomics Resources

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Protein Alignment BoYb and AT3G09620

DIOPT Version :10

Sequence 1:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_001327248.1 Gene:AT3G09620 / 820119 AraportID:AT3G09620 Length:990 Species:Arabidopsis thaliana


Alignment Length:473 Identity:88/473 - (18%)
Similarity:163/473 - (34%) Gaps:148/473 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RPVRRFAEVSLLPDILETMRNLGLNRLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAYIPPVC 115
            ||::.:.:..|...||:|::.|...:.:.:|:...|.:.  ||...:.|....||:|..::.|: 
plant   394 RPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIM--SGRDCIGVAKTGSGKTLGFVLPM- 455

  Fly   116 HAVSRALMDFTGQCEDVEHDISQP-----DRYGPIALILVPDLRRVHQVSAMCLALLRKAHKNDS 175
                            :.|...||     |  |||.|::.|....|.|:    .:.:||..|...
plant   456 ----------------LRHIKDQPPVEAGD--GPIGLVMAPTRELVQQI----YSDIRKFSKALG 498

  Fly   176 VTLALNVSSTKSSQFFLKLLNGVGCLVATPAQLVWFWQEAPG-LMRFPCLQFLVYDDVDLMSREQ 239
            :........:..:|...:|..|...:|.||.:::.....:.| :.....:.:||.|:.|.|....
plant   499 IICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMG 563

  Fly   240 LQ-DVQQVLQEILPLSHSPQVVMVSKSYCHTLMSKLRAVNDKPALVFGDILEAALYGGTRIRISI 303
            .: .:.:::|.|.|   ..|.|:.|.::...:.:..|.|.:||..:        ..||..:    
plant   564 FEPQITRIVQNIRP---DRQTVLFSATFPRQVETLARKVLNKPVEI--------QVGGRSV---- 613

  Fly   304 MRSEAKANAVVQMLQQCSPEEFRTVIFCSDDGDMQCLVAALEVQHYSCLPYYQTADLEVRQQVHS 368
                  .|..:..|.:..||.                      :.:|.|       ||:   :..
plant   614 ------VNKDITQLVEIRPES----------------------ERFSRL-------LEL---LGE 640

  Fly   369 WQARSNGVILLCTDNCPELDIRDAHTIIHHSMSHSWSKFKLRHLKISDNLCNMVKPTASIVK--- 430
            |..:...::.:                  .|...|.|.||       .::||::..|:...:   
plant   641 WYEKGKVLVFV------------------RSQEKSISDFK-------SDVCNLLIATSVAARGLD 680

  Fly   431 -KPLYSLVLLDDNNH-----------------------------RQLPRLVDFLQL-HQKVDHRL 464
             |.|..:|..|..||                             :..|.||..|:| .|.|...:
plant   681 VKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDV 745

  Fly   465 VEVAK----RIRQELGKA 478
            ..||:    :::|.:.:|
plant   746 KAVAEGFMAKVKQGIEQA 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BoYbNP_649430.1 DEAD-like_helicase_N 104..>235 CDD:475120 29/136 (21%)
Tudor_SF 531..663 CDD:470623
PLN00203 <659..>749 CDD:215101
AT3G09620NP_001327248.1 PTZ00121 <3..294 CDD:173412
DEADc_DDX46 386..607 CDD:350711 52/248 (21%)
SF2_C_DEAD 618..719 CDD:350174 22/157 (14%)
KH-I_AtRH42_like 887..989 CDD:411903
Blue background indicates that the domain is not in the aligned region.

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