DRSC/TRiP Functional Genomics Resources

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Protein Alignment BoYb and ddx46

DIOPT Version :10

Sequence 1:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_001019988.2 Gene:ddx46 / 321948 ZFINID:ZDB-GENE-030131-667 Length:1035 Species:Danio rerio


Alignment Length:856 Identity:157/856 - (18%)
Similarity:288/856 - (33%) Gaps:281/856 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SEY-------AVAHANCQLRPVRRFAEVSLLPDILETMRNLGLNRLLRLQSYTWPHLAGGSGHGA 96
            |||       :|....|. :|::.:.:..:...:|..::.....:...:|:...|.:.  ||...
Zfish   336 SEYRLELEGISVKGKGCP-KPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIM--SGRDL 397

  Fly    97 MIVGSPASGRTFAYIPPVCHAVSRALMDF--TGQCEDVEHDISQPDRYGPIALILVPDLRRVHQV 159
            :.:....||:|.|::.|    :.|.::|.  .|:.|            ||:|:|:.|......|:
Zfish   398 IGIAKTGSGKTIAFLLP----MFRHILDQRPVGEAE------------GPLAVIMTPTRELALQI 446

  Fly   160 SAMCLALLRKAHKNDSVTLALNV----SSTKSSQFFLKLLNGVGCLVATPAQLVWFWQEAPG--- 217
            :..|        |..|.:|||.|    ..|..|:...:|..|...:|.||.:::.......|   
Zfish   447 TKEC--------KKFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVT 503

  Fly   218 -LMRFPCLQFLVYDDVDLMSREQLQ-DVQQVLQEILPLSHSPQVVMVSKSYCHTLMSKLRAVNDK 280
             |.|   :.::|.|:.|.|.....: .|.:::..:.|   ..|.||.|.::..|:.:..|.:..|
Zfish   504 NLRR---VTYVVIDEADRMFDMGFEPQVMRIVDNVRP---DRQTVMFSATFPRTMEALARRILSK 562

  Fly   281 P--------ALVFGDILEAALYGGTRIRISIMRSEAKANAVVQMLQQCSPEEFRTVIFCSDDGDM 337
            |        ::|..|:.:         .:.::..|.|...::::|.... |:...:||.......
Zfish   563 PVEVQVGGRSVVCSDVEQ---------HVIVIEEEKKFLKLLEILGHYQ-EKGSVIIFVDKQEHA 617

  Fly   338 QCLVAALEVQHYSCLPYYQTADLEVRQQVHSWQARSNGVILLCTDNCPELDIRDAHTIIHHSMSH 402
            ..|:..|....|.|:            .:|.                 .:|..|..:||      
Zfish   618 DGLLKDLMKASYPCM------------SLHG-----------------GIDQYDRDSII------ 647

  Fly   403 SWSKFKLRHLKISDNLCNMVKPTASIVK----KPLYSLVLLDDNNHRQLPRLVDFLQLHQKVDHR 463
              :.||       :..|.::..|:...:    |.|..:|.....||.:     |::       ||
Zfish   648 --NDFK-------NGACRLLVATSVAARGLDVKQLILVVNYSCPNHYE-----DYV-------HR 691

  Fly   464 LVEVAKRIRQELGKARNDQHQLCDQILVLGKCYDPVCESRHRLSHIDRRPDYLPASGDVKVQLVK 528
                |.|    .|:|.|.           |..|..:.|.:.|.            |||:      
Zfish   692 ----AGR----TGRAGNK-----------GYAYTFITEGQARY------------SGDI------ 719

  Fly   529 VYSPTHFCVRLLEHLPPKGTWRMMEYSAVQEFRMQLTQIKEPRRYWPPVAGAICMYHTTFT---- 589
                       |:.|...|:      |...|.....|..||.::    ..|.|....:.|:    
Zfish   720 -----------LKALELSGS------SVPAELEQLWTNFKEQQK----AEGKIIKSSSGFSGKGF 763

  Fly   590 ----------KERVRVLKVAAIKNTNIVQSDLTVKLQALDVDTRIFSTNCGKLFECPEALQQEAP 644
                      .||.::.|.|      :...|...:..|||:|.:|.|     :|...:.::    
Zfish   764 KFDETEHALANERKKLQKAA------LGLHDSDDEDTALDIDEQIES-----MFNSKKRVK---- 813

  Fly   645 LACDLRLPGWV-----------------------PYFGERSWTEENIRNVNL-----ILTQLPK- 680
               |...||.|                       |..|       ||:.:.:     :..|..| 
Zfish   814 ---DFSAPGSVSAGSAGGVSGSVSAVSGLGSLSTPSAG-------NIQKLEIAKKLALRIQAQKN 868

  Fly   681 ------DHFLQAKILFVAAGTLFVQDL----VAIMYADQFKAHVRHLSLARRLVEATLVKRSENA 735
                  |...||....:..||:....:    :|...|::..|.:.:..:.:...|    :::..|
Zfish   869 LGAEAQDVMQQATNAILRGGTIIAPSVSAKTIAEQQAEKINAKLNYTPVEKLEEE----RQAAEA 929

  Fly   736 AEMIREFFAEVIIEDDIDENVQDSKEKANSKPHEKMKGKMTDQPAKLQ------SQPPLSGRCLR 794
            ||.::.:..|:    :|::..|.::.|..||...:..|:.::....::      .:.|..|.  |
Zfish   930 AETVKRYEEEL----EINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGE--R 988

  Fly   795 LANMAHESVKE 805
            ...:|.||..|
Zfish   989 KIYLAIESANE 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BoYbNP_649430.1 DEAD-like_helicase_N 104..>235 CDD:475120 35/140 (25%)
Tudor_SF 531..663 CDD:470623 29/168 (17%)
PLN00203 <659..>749 CDD:215101 18/105 (17%)
ddx46NP_001019988.2 Q motif 357..385 1/27 (4%)
DEAD box 514..517 1/2 (50%)

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