DRSC/TRiP Functional Genomics Resources

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Protein Alignment EMC4 and EMC4

DIOPT Version :10

Sequence 1:NP_649424.1 Gene:EMC4 / 40505 FlyBaseID:FBgn0037199 Length:166 Species:Drosophila melanogaster
Sequence 2:NP_011283.1 Gene:EMC4 / 852620 SGDID:S000003200 Length:190 Species:Saccharomyces cerevisiae


Alignment Length:196 Identity:63/196 - (32%)
Similarity:97/196 - (49%) Gaps:43/196 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AKQNPKKLKWA---LD------FNGSKNADIPSPLGYNPSALVNQSEVVRDQR------------ 46
            ::|.|  .:||   ||      :|...:..:|||.|:..::  ::..|.|.|:            
Yeast     2 SEQEP--YEWAKHLLDTKYIEKYNIQNSNTLPSPPGFEGNS--SKGNVTRKQQDATSQTTSLAQK 62

  Fly    47 -----LVIKKSWDLALGPLKNIPMNLFIMYMSGNSISIFPIMMVGMMLIRPIKAIFTTQVTSKMA 106
                 |.::|:|.:||.|.|:||||:|:.||||.|:.|.|||...|:|..||||||:|:...|..
Yeast    63 NQITVLQVQKAWQIALQPAKSIPMNIFMSYMSGTSLQIIPIMTALMLLSGPIKAIFSTRSAFKPV 127

  Fly   107 EGAQGTGQRI-------VYFLGNLANVALALYKCQSMGLLPTHASDWLAFVQPQTRLEYYGGGIS 164
            .|.:.|..::       :.|.|.|  :.:...|..||||:|....|||    |..|:.:|..|:.
Yeast   128 LGNKATQSQVQTAMFMYIVFQGVL--MYIGYRKLNSMGLIPNAKGDWL----PWERIAHYNNGLQ 186

  Fly   165 F 165
            :
Yeast   187 W 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC4NP_649424.1 DUF1077 43..152 CDD:461902 47/132 (36%)
EMC4NP_011283.1 DUF1077 60..176 CDD:461902 43/112 (38%)

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