DRSC/TRiP Functional Genomics Resources

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Protein Alignment EMC4 and emc4

DIOPT Version :10

Sequence 1:NP_649424.1 Gene:EMC4 / 40505 FlyBaseID:FBgn0037199 Length:166 Species:Drosophila melanogaster
Sequence 2:NP_988876.1 Gene:emc4 / 394471 XenbaseID:XB-GENE-965547 Length:180 Species:Xenopus tropicalis


Alignment Length:169 Identity:91/169 - (53%)
Similarity:116/169 - (68%) Gaps:16/169 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KKLKWALDF--NGSKN-------ADIPSPLGYNPSALVNQSEVVRDQRLVIKKSWDLALGPLKNI 63
            ::.|||::|  .||:.       .|...|:||:...:.:.|....|..||.|:.||:||||||.|
 Frog    13 RRFKWAIEFGSGGSRGRGERGGLQDSMYPVGYSDKQVPDTSVQESDHILVEKRCWDIALGPLKQI 77

  Fly    64 PMNLFIMYMSGNSISIFPIMMVGMMLIRPIKAIFTTQVTSKMAEGAQGTGQR----IVYFLGNLA 124
            |||||||||:||:|||||||||.||..|||:|:..|..|.|:.|   .:|||    :||.:|||.
 Frog    78 PMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALLATPATFKLLE---SSGQRFLQGLVYLIGNLL 139

  Fly   125 NVALALYKCQSMGLLPTHASDWLAFVQPQTRLEYYGGGI 163
            .:|||:|||||||||||||||||||::|..|:||.|||:
 Frog   140 GLALAVYKCQSMGLLPTHASDWLAFIEPPERMEYTGGGL 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC4NP_649424.1 DUF1077 43..152 CDD:461902 73/112 (65%)
emc4NP_988876.1 DUF1077 53..167 CDD:461902 74/116 (64%)

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