DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trxr-2 and GR1

DIOPT Version :9

Sequence 1:NP_524216.1 Gene:Trxr-2 / 40475 FlyBaseID:FBgn0037170 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001030756.2 Gene:GR1 / 822003 AraportID:AT3G24170 Length:499 Species:Arabidopsis thaliana


Alignment Length:506 Identity:163/506 - (32%)
Similarity:257/506 - (50%) Gaps:49/506 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ASRPRYDYDLVVLGGGSAGLACAKEAAGCGARV-LC---FDYVKPTPVGTKWGIGGTCVNVGCIP 86
            |:...||:||.|:|.||.|:..|:.:|..||:| :|   |..:....:|   |:|||||..||:|
plant    19 ANATHYDFDLFVIGAGSGGVRAARFSANHGAKVGICELPFHPISSEEIG---GVGGTCVIRGCVP 80

  Fly    87 KKLMHQASLLGEAVHEAVAYGWNVDDTNIRPDWRKLVRSVQNHIKSVNWVTRVDLRDKKVEYVNS 151
            ||::...:..|..:.:|..|||.::: .:...|:||::...:.|..:|.:.:..|.:..|:....
plant    81 KKILVYGATYGGELEDAKNYGWEINE-KVDFTWKKLLQKKTDEILRLNNIYKRLLANAAVKLYEG 144

  Fly   152 MATFRDSHTIEYVAMPGAEHRQVTSEYVVVAVGGRPRYPDIPGAVELGITSDDIFSYEREPGRTL 216
            .......:.:|...:.|.: ...|::::::|.|.|.:.|:|||. ||.||||:..|.|..|.|.:
plant   145 EGRVVGPNEVEVRQIDGTK-ISYTAKHILIATGSRAQKPNIPGH-ELAITSDEALSLEEFPKRAI 207

  Fly   217 VVGAGYVGLECACFLKGLGYEPTVMVR-SIVLRGFDRQMSELLAAMMTERGIPFLGTTIPKAVER 280
            |:|.||:.:|.|...:|:|....:..| .:.|||||.:|..|:|..:..||:.            
plant   208 VLGGGYIAVEFASIWRGMGATVDLFFRKELPLRGFDDEMRALVARNLEGRGVN------------ 260

  Fly   281 QADGRLLVRYRNTTTQMDGSD-------------VFDTVLWAIGRKGLIEDLNLDAAGVKTHD-D 331
                   :..:.:.||:..:|             |.|.||:|.||....:.|||:|.||:... .
plant   261 -------LHPQTSLTQLTKTDQGIKVISSHGEEFVADVVLFATGRSPNTKRLNLEAVGVELDQAG 318

  Fly   332 KIVVDAAEATSVPHIFAVGDIIYGRPELTPVAILSGRLLARRLFAGSTQLMDYADVATTVFTPLE 396
            .:.||....|::|.|:||||.. .|..|||||::.....|...|.|.....:|::||..||....
plant   319 AVKVDEYSRTNIPSIWAVGDAT-NRINLTPVALMEATCFANTAFGGKPTKAEYSNVACAVFCIPP 382

  Fly   397 YSCVGMSEETAIELRGADNIEVFHGYYKPTEFFIPQKSVRHCYLKAVAEVSGDQKILGLHYIGPV 461
            .:.||:|||.|:| :...:|.||...:.|.:..|..:..: ..:|.:.:...| |::|....||.
plant   383 LAVVGLSEEEAVE-QATGDILVFTSGFNPMKNTISGRQEK-TLMKLIVDEKSD-KVIGASMCGPD 444

  Fly   462 AGEVIQGFAAALKTGLTVKTLLNTVGIHPTTAEEF-TRLSITKRSGRDPTP 511
            |.|::||.|.|||.|.|.....:||||||::|||| |..|:|:|....|.|
plant   445 AAEIMQGIAIALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRIAHKPKP 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr-2NP_524216.1 NADB_Rossmann 29..>68 CDD:304358 16/42 (38%)
TGR 31..515 CDD:273624 162/501 (32%)
NADB_Rossmann <144..239 CDD:304358 29/94 (31%)
Pyr_redox 214..288 CDD:278498 20/74 (27%)
Pyr_redox_dim 388..497 CDD:280934 41/109 (38%)
GR1NP_001030756.2 PLN02507 1..499 CDD:215281 163/506 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 187 1.000 Domainoid score I973
eggNOG 1 0.900 - - E1_COG1249
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 264 1.000 Inparanoid score I952
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D581771at2759
OrthoFinder 1 1.000 - - FOG0000578
OrthoInspector 1 1.000 - - mtm1060
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48105
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1089
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.970

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