DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hem and kif6

DIOPT Version :9

Sequence 1:NP_524214.1 Gene:Hem / 40462 FlyBaseID:FBgn0011771 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_001106482.1 Gene:kif6 / 100127668 XenbaseID:XB-GENE-1014042 Length:753 Species:Xenopus tropicalis


Alignment Length:488 Identity:94/488 - (19%)
Similarity:166/488 - (34%) Gaps:140/488 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   700 FAFAPREYLCQNLEHRFSRDLVGMVMFN---------QETME-----------IAKPSELLASVR 744
            ::.:..|....:||....|||....:.|         |||.:           ||||  :..||.
 Frog    22 YSVSNEEERASSLEILVPRDLADGFVNNKRESYKFRFQETFDQDVKQDTIFESIAKP--VAESVL 84

  Fly   745 AYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHG--EKTIAALYNTWY---SEVLLRRVSAGN 804
            ...|  .|:..|......:.|.  :....:.....|  .:|::.::..:.   |:|....||...
 Frog    85 TGYN--GTIFAYGQTGSGKTFT--ITGGAERYSDRGIIPRTLSYMFEQFQKDSSKVYTAHVSYLE 145

  Fly   805 IVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGP-YGIKTLNETLMWHIANQVQELKS 868
            |   .|:..:..:.|.       .|.|.|.:|..:..:..| ..|...|.:|: ..:|:.:.|..
 Frog   146 I---YNECGYDLLDPR-------HEASKLEDLPKVTIMEDPDQNIHLKNLSLL-QASNEEEALNL 199

  Fly   869 L----------------VSTNKEVLITLRTSFDKPEVMKEQFKRLQDVD-----RVL------QR 906
            |                .||....:.|:..|..:|.....:..:|..||     ||.      |.
 Frog   200 LFLGDTNRMIAETPMNQASTRSHCIFTIHVSSKEPGSATVRRSKLHLVDLAGSERVAKTGVGGQL 264

  Fly   907 MTIIGVIICFRNLVHEALVDVLDKRIPFLLSSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPT 971
            :|....|....:.:.:.::.:.:|.           :.|:|..:.: :.|.:..:.|..|..  |
 Frog   265 LTEAKYINLSLHYLEQVIIALAEKN-----------RSHIPYRNSM-MTSVLRDSLGGNCMT--T 315

  Fly   972 LATTLKSKKPEFDEGEHLTACLLMVFVAVSIPKLARNENSFYRATIDGHSNNTHCMAAAINNIFG 1036
            :..||...|...||.  ::.|.....||     |.:||                   |.:|.   
 Frog   316 MIATLSLDKRNIDES--ISTCRFAQRVA-----LIKNE-------------------AILNE--- 351

  Fly  1037 ALFTICGQSDME----DRMKEFLALASSSLLRLGQESDKEATRNRESIYLLLDEIVK-----QSP 1092
                   ::|.:    ...||...|.....|..|::..:|.|   |...|.|:|.|:     :.|
 Frog   352 -------ETDPQLIIVRLRKEIQGLKGELALLTGEQRTEELT---EDETLRLEEQVRGFLEDRDP 406

  Fly  1093 FLTMDL------LESCFPYVLIRNAYHGVYKQE 1119
            ..::|:      ::.||.:  |:...||..::|
 Frog   407 ESSLDMGADMRKIQYCFAF--IKKLLHGKKEEE 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HemNP_524214.1 Nckap1 12..1118 CDD:286778 93/485 (19%)
kif6NP_001106482.1 Motor_domain 5..341 CDD:354959 66/351 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1917
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.860

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