DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srpk79D and srpk1b

DIOPT Version :10

Sequence 1:NP_001246881.1 Gene:Srpk79D / 40461 FlyBaseID:FBgn0025702 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_001074138.3 Gene:srpk1b / 791187 ZFINID:ZDB-GENE-070112-2292 Length:640 Species:Danio rerio


Alignment Length:731 Identity:273/731 - (37%)
Similarity:376/731 - (51%) Gaps:135/731 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 PRGTLSTTDEIYPDSSDSSLYVSDEEQEDASQYCRGGYHPVVIGDIFDNRFRVVRKLGWGHFSTV 361
            |||.....|.: .:..:..|...||||||.:.||:||||.|.|||:|:.|:.|:|||||||||||
Zfish    28 PRGAAQQPDAL-QEQDEEILGSDDEEQEDPNDYCKGGYHHVKIGDLFNGRYHVIRKLGWGHFSTV 91

  Fly   362 WLCRDLKDEKYVALKVVKSAPHYIETAADEIRLLEAIRDADPMDVKRERIVRLMNHFTVRGVNGM 426
            ||..|.:.:::||:||||||.||.|||.|||:||:|:|:.|..|..||::|:|::.|.:.||||.
Zfish    92 WLAWDTQGKRFVAMKVVKSAEHYTETALDEIKLLKAVRNTDQNDPSREKVVQLLDDFKISGVNGT 156

  Fly   427 HTCLVFEALGCSLYKLIVKNNYQGLAIAQVRNIIRQVLEGLDYLHSKCSIIHTDIKPENILLVID 491
            |.|:|||.||..|.|.|:|:|||||.:..|::||||||:||||||:||.||||||||||||:   
Zfish   157 HVCMVFEVLGHHLLKWIIKSNYQGLPLPCVKSIIRQVLQGLDYLHTKCKIIHTDIKPENILM--- 218

  Fly   492 NAAAMNQQIDDEINSLRVKGVDFPDSYISSIEKQTKSRAKWPLIEPNGSTNTNTNTSNSTATNSN 556
                                 |..::|:..:..:.....|.....|:||            ..|.
Zfish   219 ---------------------DVNEAYVKRLAAEATEWQKSGAPPPSGS------------AVST 250

  Fly   557 SSTPLAAVIMSTLDKEDTTTTTSSTLNSNTTSSLASKYSSLLGDSECNGGLGGSANINNRYRTEK 621
            :..|..|..||.                                             |.:.:.:|
Zfish   251 APAPKQATKMSK---------------------------------------------NKKKKMKK 270

  Fly   622 KITAKSSGDCDEDAESDTLGEQSTLASTMDSPTDLDPEPELDSKPNTVPEPSEGPIPEQPTPNST 686
            |          :..:::.|.::......::...|...|.:.|               |..||:||
Zfish   271 K----------QKRQAELLEKRILEIEGLEKGLDGGEEEDED---------------ETETPDST 310

  Fly   687 NSSCPSHNTATIAKSKINSNILSTCTSLTSTNEYCFTNTNTTTASTPSAPPSATPSSAPALASAT 751
            :|...||....|          ||.|:|..|:|.......:.....||.....:......:...|
Zfish   311 SSVPSSHTLQDI----------STETTLDGTSEAWSQVRGSVNGHIPSPEDEQSLDVQQQMKDET 365

  Fly   752 PPSTCTPSFTQIAPSATAPATSTT--------CTTSAEFYDGDHKTTSTSTTTTSNAISSATTTT 808
            |.:..........|:...||.:.|        |.::|   ||:....|....:....:....:.|
Zfish   366 PVNPYDSGNETSEPTNPYPACNGTEETEPSPACLSAA---DGNGALISGMVESQGCRVQDGESLT 427

  Fly   809 ATTTTAIAKLNVH--ANAIPSQNQS-----QSSQNNTYTIQSLIDNSNVRVKIADLGNACYDYHH 866
            |......|::...  ..|:|.:.:|     .::.|........::...::||||||||||:.:.|
Zfish   428 AELKDPRAEMEAEPGTQAVPEEEESLKDAKTAAGNLLVNPLEPLNAEKIQVKIADLGNACWVHKH 492

  Fly   867 FTEDIQTRQYRSIEVLLGAPYNYTADIWSTACLAFELATGDYLFDPHAGESYSRDEDHLAHIVEL 931
            ||:|||||||||:|||:|..|...||||||||:|||||||||||:||:||.|||||||:|.|:||
Zfish   493 FTDDIQTRQYRSLEVLIGTGYGTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIALIIEL 557

  Fly   932 LGSIPQSVIFRGKHGLKYFTSYGSLRNITKLKPWSLMNVLVEKYDWDPVEAKKFSDFLLPMLEYN 996
            ||.||:.::..||:..::||..|.||:|||||||.|.:||||||:|...||:.|||||||||:..
Zfish   558 LGKIPRKLVMNGKYSKEFFTKKGDLRHITKLKPWGLQDVLVEKYEWHREEAQNFSDFLLPMLDLI 622

  Fly   997 PVIRASAAECLQHPWL 1012
            |..||:|||||:|.|:
Zfish   623 PEKRATAAECLRHSWI 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Srpk79DNP_001246881.1 Protein Kinases, catalytic domain 336..>504 CDD:473864 95/167 (57%)
PHA03307 627..>759 CDD:223039 23/131 (18%)
Protein Kinases, catalytic domain <844..1012 CDD:473864 107/167 (64%)
srpk1bNP_001074138.3 None

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