DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srpk79D and srpk1b

DIOPT Version :9

Sequence 1:NP_001246881.1 Gene:Srpk79D / 40461 FlyBaseID:FBgn0025702 Length:1018 Species:Drosophila melanogaster
Sequence 2:XP_005155715.1 Gene:srpk1b / 791187 ZFINID:ZDB-GENE-070112-2292 Length:643 Species:Danio rerio


Alignment Length:770 Identity:282/770 - (36%)
Similarity:387/770 - (50%) Gaps:158/770 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 LSLSLSPPLNRRRDMPALRGPFVSLS------------EPRGTLSTTDEIYPDSSDSSLYVSDEE 322
            |||:..|.|           |.::||            .|||.....|.: .:..:..|...|||
Zfish     3 LSLACQPLL-----------PSLALSLMGIRASCRPDPHPRGAAQQPDAL-QEQDEEILGSDDEE 55

  Fly   323 QEDASQYCRGGYHPVVIGDIFDNRFRVVRKLGWGHFSTVWLCRDLKDEKYVALKVVKSAPHYIET 387
            |||.:.||:||||.|.|||:|:.|:.|:|||||||||||||..|.:.:::||:||||||.||.||
Zfish    56 QEDPNDYCKGGYHHVKIGDLFNGRYHVIRKLGWGHFSTVWLAWDTQGKRFVAMKVVKSAEHYTET 120

  Fly   388 AADEIRLLEAIRDADPMDVKRERIVRLMNHFTVRGVNGMHTCLVFEALGCSLYKLIVKNNYQGLA 452
            |.|||:||:|:|:.|..|..||::|:|::.|.:.||||.|.|:|||.||..|.|.|:|:|||||.
Zfish   121 ALDEIKLLKAVRNTDQNDPSREKVVQLLDDFKISGVNGTHVCMVFEVLGHHLLKWIIKSNYQGLP 185

  Fly   453 IAQVRNIIRQVLEGLDYLHSKCSIIHTDIKPENILLVIDNAAAMNQQIDDEINSLRVKGVDFPDS 517
            :..|::||||||:||||||:||.||||||||||||:                        |..::
Zfish   186 LPCVKSIIRQVLQGLDYLHTKCKIIHTDIKPENILM------------------------DVNEA 226

  Fly   518 YISSIEKQTKSRAKWPLIEPNGSTNTNTNTSNSTATNSNSSTPLAAVIMSTLDKEDTTTTTSSTL 582
            |:..:..:.....|.....|:||            ..|.:..|..|..||.              
Zfish   227 YVKRLAAEATEWQKSGAPPPSGS------------AVSTAPAPKQATKMSK-------------- 265

  Fly   583 NSNTTSSLASKYSSLLGDSECNGGLGGSANINNRYRTEKKITAKSSGDCDEDAESDTLGEQSTLA 647
                                           |.:.:.:||          :..:::.|.::....
Zfish   266 -------------------------------NKKKKMKKK----------QKRQAELLEKRILEI 289

  Fly   648 STMDSPTDLDPEPELDSKPNTVPEPSEGPIPEQPTPNSTNSSCPSHNTATIAKSKINSNILSTCT 712
            ..::...|...|.:.|               |..||:||.|...||....|          ||.|
Zfish   290 EGLEKGLDGGEEEDED---------------ETETPDSTPSVPSSHTLQDI----------STET 329

  Fly   713 SLTSTNEYCFTNTNTTTASTPSAPPSATPSSAPALASATPPSTCTPSFTQIAPSATAPATSTT-- 775
            :|..|:|.....|.:.....||.....:......:...||.:..........|:...||.:.|  
Zfish   330 TLDGTSEAWSQVTGSVNGHIPSPEDEQSLDVQQQMKDETPVNPYDSGNETSEPTNPYPACNGTEE 394

  Fly   776 ------CTTSAEFYDGDHKTTSTSTTTTSNAISSATTTTATTTTAIAKLNVH--ANAIPSQNQS- 831
                  |.::|   ||:....|....:....:....:.||......|::...  ..|:|.:.:| 
Zfish   395 TEPSPACLSAA---DGNGALISGMVESQGCRVQDGESLTAELKDPRAEMEAEPGTQAVPEEEESL 456

  Fly   832 ----QSSQNNTYTIQSLIDNSNVRVKIADLGNACYDYHHFTEDIQTRQYRSIEVLLGAPYNYTAD 892
                .::.|........::...::||||||||||:.:.|||:|||||||||:|||:|..|...||
Zfish   457 KDAKTAAGNLLVNPLEPLNAEKIQVKIADLGNACWVHKHFTDDIQTRQYRSLEVLIGTGYGTPAD 521

  Fly   893 IWSTACLAFELATGDYLFDPHAGESYSRDEDHLAHIVELLGSIPQSVIFRGKHGLKYFTSYGSLR 957
            ||||||:|||||||||||:||:||.|||||||:|.|:||||.||:.::..||:..::||..|.||
Zfish   522 IWSTACMAFELATGDYLFEPHSGEDYSRDEDHIALIIELLGKIPRKLVMNGKYSKEFFTKKGDLR 586

  Fly   958 NITKLKPWSLMNVLVEKYDWDPVEAKKFSDFLLPMLEYNPVIRASAAECLQHPWL 1012
            :|||||||.|.:||||||:|...||:.|||||||||:..|..||:|||||:|.|:
Zfish   587 HITKLKPWGLQDVLVEKYEWHREEAQNFSDFLLPMLDLIPEKRATAAECLRHSWI 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Srpk79DNP_001246881.1 STKc_SRPK 336..>504 CDD:271038 95/167 (57%)
S_TKc 347..>492 CDD:214567 89/144 (62%)
STKc_SRPK <844..1012 CDD:271038 107/167 (64%)
srpk1bXP_005155715.1 PKc_like 70..>256 CDD:304357 102/221 (46%)
S_TKc 80..>224 CDD:214567 90/167 (54%)
PKc_like <465..641 CDD:304357 108/175 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1290
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290680at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100556
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.680

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