DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddx1 and CG9630

DIOPT Version :10

Sequence 1:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster


Alignment Length:364 Identity:93/364 - (25%)
Similarity:151/364 - (41%) Gaps:79/364 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 KPAPNAPQ---AIIMEPSRELAEQTYNQIEKFKYHLSNPEVRSLLLIGGVRLEEQKAQLMQGTH- 341
            |..|..|:   |:::.|:||||.|....:.:|..|.....:...|::||..:||..|.|.:.|. 
  Fly    74 KETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRETPC 138

  Fly   342 IVVGTPGRLEEMI---NSGLVLLTHCR---FFVLDEADALLKQGYTELIDRLHKQIPKITSDGRR 400
            |:|.||||||::.   ...|.|....:   |.||||||.||..|:...::.:...:|:....|  
  Fly   139 ILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTG-- 201

  Fly   401 LQMVVCSATLHAFEVKKMAERLMHFPTWVDLKGEDAV--PETVHHVVCLVDPQMD--TTWQSLRQ 461
                :.||| ...||..:....:..|..|.:|.:.:|  |..:.:...:|:|::.  ...:.|..
  Fly   202 ----LFSAT-QTTEVTDLIRAGLRNPVLVSVKEKASVNTPARLQNFYRIVEPELKFVALLEFLSS 261

  Fly   462 PIGTDGVHDRDNVHPGNHSKETLSQAVKLLKGEYCVHAIDKHNMDRAIIFCRTKQDC-------D 519
            |....|                                       :.::|..|   |       :
  Fly   262 PATVIG---------------------------------------KVMVFFPT---CACVEYWAE 284

  Fly   520 NLERFLRQRGGKHYSCVCLHGDRKPQERKENLEMFKRQQVKFLICTDVAARGLDITGLPFMINVT 584
            .|...|.:|     :.:.:||..| .:|...:|.|:......|:||||.|||||:..:.:::...
  Fly   285 ALPPLLPKR-----TVLGIHGKMK-NKRANVVEKFRNTPQAVLLCTDVLARGLDVPEIEWVVQWD 343

  Fly   585 LPDDKTNYVHRIGRVGRAERMGLAISLVATVP-EKVWYH 622
            .|...:::|||:||..|....|.|  ||..:| |..:.|
  Fly   344 PPSTASSFVHRVGRTARQGNEGNA--LVFLLPSEDAYVH 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ddx1NP_524212.2 DEAD-like_helicase_N 4..>73 CDD:475120
SPRY_DDX1 91..242 CDD:293933
SrmB 283..613 CDD:440279 88/350 (25%)
CG9630NP_649777.1 DEADc_DDX55 18..226 CDD:350718 48/158 (30%)
SF2_C_DEAD 239..371 CDD:350174 38/181 (21%)
DUF4217 414..470 CDD:464056
Blue background indicates that the domain is not in the aligned region.

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