DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddx1 and CG8611

DIOPT Version :10

Sequence 1:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster


Alignment Length:378 Identity:107/378 - (28%)
Similarity:167/378 - (44%) Gaps:84/378 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 AIIMEPSRELAEQTYNQIEKFKYHLSNPEVRSL--LLIGGVRLEEQKAQLMQGTHIVVGTPGRL- 350
            |:::.|:|||..|||..|:|    |..|....:  .|:||...:.:||:|.:|.:|::|||||| 
  Fly   405 ALVIVPTRELVMQTYELIQK----LVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLV 465

  Fly   351 EEMINSGLVLLTHCRFFVLDEADALLKQGY-------TELIDRLH-----KQIPKITSDGRRLQM 403
            :.::::....||..:|.:|||||.||:.||       .|.||:..     |::|       :||.
  Fly   466 DHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELP-------QLQR 523

  Fly   404 VVCSATLHAFEVKKMAERLMHFPTWVD---------LKGEDAVPETVHHVVCLVDP-----QMDT 454
            ::.||||.: :|:::|...:..|.::|         ||.:|...:.....:..||.     |.|.
  Fly   524 MLLSATLTS-QVQQLAGLTLKNPLYIDNSDEAASAALKSKDGYQKETIEALLEVDDGLGEYQEDV 587

  Fly   455 TW-QSLRQPIGTDGVHDRDNVHPGNHSKETLSQAVKLLKGEYCVHAIDKHNMDRAIIFCRTKQ-- 516
            |. .|:.:.:....|     |.|   .|..|.....||..|  |.|..|  ..:||:|..|.:  
  Fly   588 TGVLSIPENLQLSYV-----VVP---PKLRLVALSSLLAKE--VDASPK--QFKAIVFMSTTEMV 640

  Fly   517 --DCDNLERFLRQR-----------------------GGKHYSCVCLHGDRKPQERKENLEMFKR 556
              ..|.|...|.:|                       |.:.:.   |||.....||:.....|:.
  Fly   641 NFHHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPLLQGLRFFK---LHGSMTQTERQGVFRGFRD 702

  Fly   557 QQVKFLICTDVAARGLDITGLPFMINVTLPDDKTNYVHRIGRVGRAERMGLAI 609
            .....|:.|||..||:|:..:..::..|.|....::|||:||..||.|.|.|:
  Fly   703 CASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVHRVGRTARAGRKGRAV 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ddx1NP_524212.2 DEAD-like_helicase_N 4..>73 CDD:475120
SPRY_DDX1 91..242 CDD:293933
SrmB 283..613 CDD:440279 107/378 (28%)
CG8611NP_788922.1 PTZ00108 <6..263 CDD:240271
PRK11776 330..>770 CDD:236977 107/378 (28%)
DEADc_DDX31 339..549 CDD:350707 52/155 (34%)
DUF4217 806..866 CDD:464056
Blue background indicates that the domain is not in the aligned region.

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