DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddx1 and mahe

DIOPT Version :10

Sequence 1:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_572424.1 Gene:mahe / 31707 FlyBaseID:FBgn0029979 Length:945 Species:Drosophila melanogaster


Alignment Length:728 Identity:164/728 - (22%)
Similarity:257/728 - (35%) Gaps:233/728 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GGDVLMAAETGSGKTGAFCLPILQIVWETLRDLEEGKAGKGGAIGGAVTPWTMSFFDRGNALAVT 103
            ||..:..|.|.:|.. .|..|...:.:.....|..|.||.||.     .|:...     |.:|..
  Fly    55 GGAGINGAATAAGSM-HFGQPYGVMTYGIQNGLGMGAAGSGGG-----NPYRQQ-----NGVAFA 108

  Fly   104 PDGLRCQSREFKEWHGCRATTGVRGKGKFYFEATVTDEGLCRVGWSTQQANLDLGTCRM-----G 163
            .:||           |..|..|..|.|                |:..|:........|.     |
  Fly   109 GNGL-----------GGGAGGGSGGSG----------------GYGGQRGKNPTYAQRYQKPNNG 146

  Fly   164 FGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLKNQEVS---------------------FTKN 207
            .|..| |.:|||     |..|     .:|.|...:..|:.                     |.|:
  Fly   147 AGVAG-GYQSNN-----YNAA-----ALGMLSKEERAEIQREKAKNPGRNLVKPKWENLEPFLKD 200

  Fly   208 GQNLGVAFRLPDNLAK-----------------------------ETFYPAVVLKNAEMQFNFGK 243
            ..|:.     |:.|||                             |:..||.|::..:.| .|.|
  Fly   201 FYNIH-----PNTLAKSEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQ-GFTK 259

  Fly   244 TDFKYA-------PGNGFVGACQAGPEHSKANPITGPAAGAPSAKP---APNAPQAIIMEPSREL 298
            .....:       .|...||..|.|...:.|..:  ||......:|   ....|.|:::.|:|||
  Fly   260 PTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYML--PAIVHIGNQPPIIRGEGPIALVLAPTREL 322

  Fly   299 AEQTYNQIEKFKYHLSNPEVRSLLLIGGVRLEEQKAQLMQGTHIVVGTPGRLEEMINSGLVLLTH 363
            |:|..:.:..:. ||..||:|...:.||.....|...|.:|..:::.|||||.:.:.:....|..
  Fly   323 AQQIQSVVRDYG-HLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRNTNLQR 386

  Fly   364 CRFFVLDEADALLKQGYTELIDRLHKQIPKITSDGRRLQMVVCSATLHAFEVKKMAERLMHFPTW 428
            |.:.||||||.:|..|:.   .::.|.|.:|..|   .|:|:.||                    
  Fly   387 CTYLVLDEADRMLDMGFE---PQIRKIIEQIRPD---RQVVMWSA-------------------- 425

  Fly   429 VDLKGEDAVPETVHHVVCLVDPQMDTTWQSLRQPIGTDGVHDRDNVHPG------NHS-KETLSQ 486
                                      ||....|.:..|.::|...::.|      ||: ::.:..
  Fly   426 --------------------------TWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEI 464

  Fly   487 AVKLLKGEYCVHAIDK--------HNMDRAIIFCRTKQDCDNLERFLRQRGGKHYSCVCLHGDRK 543
            ..::.|.:..|..:::        :|.::.|:|..||...:::.:.:|..|   |:...:|||:.
  Fly   465 CTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEG---YNATSIHGDKT 526

  Fly   544 PQERKENLEMFKRQQVKFLICTDVAARGLDITGLPFMINVTLPDDKTNYVHRIGRVGRAERMGLA 608
            ..||...|:.|:..:...||.||||:||||:..|.::||...|:...||||||||.||.:::|.|
  Fly   527 QNERDSVLKDFRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTA 591

  Fly   609 ------------------------------ISLVATVPEKVWYHG--EWCKSRGRSCN---NTNL 638
                                          :.|..::|....|.|  .|..:.|...|   |..:
  Fly   592 YTFFTPDNAKQARELISVLEEAGQTPSQALLDLARSMPSSGGYRGNKRWNNNSGGDRNTGGNNGI 656

  Fly   639 TEVRGCCIWYNEP 651
            .:.|.     |.|
  Fly   657 YQQRN-----NNP 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ddx1NP_524212.2 DEAD-like_helicase_N 4..>73 CDD:475120 8/33 (24%)
SPRY_DDX1 91..242 CDD:293933 36/205 (18%)
SrmB 283..613 CDD:440279 93/374 (25%)
maheNP_572424.1 DEAD-like_helicase_N 136..656 CDD:475120 136/594 (23%)

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