DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act79B and ACTRT3

DIOPT Version :10

Sequence 1:NP_524210.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_115876.3 Gene:ACTRT3 / 84517 HGNCID:24022 Length:372 Species:Homo sapiens


Alignment Length:368 Identity:183/368 - (49%)
Similarity:262/368 - (71%) Gaps:3/368 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILSLKYPIE 73
            :|:||||||.|||.||...|:.::|:|:||.:.|......|.:.| |||:||..|..|.:.||:|
Human     8 VVIDNGSGMIKAGVAGCREPQFIYPNIIGRAKGQSRAAQGGLELC-VGDQAQDWRSSLFISYPVE 71

  Fly    74 HGIITNWDDMEKVWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
            .|:||:|:|||.:|.|.:...|::.|.:.|||:||..|||.|||:::|::.||....||.|::||
Human    72 RGLITSWEDMEIMWKHIYDYNLKLKPCDGPVLITEPALNPLANRQQITEMFFEHLGVPAFYMSIQ 136

  Fly   139 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
            |||:|:|:|.|||:||:||.||:.:|||:|||.|||.:.:|||||.|||:|||.::...|....:
Human   137 AVLALFAAGFTTGLVLNSGAGVTQSVPIFEGYCLPHGVQQLDLAGLDLTNYLMVLMKNHGIMLLS 201

  Fly   204 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRTPEALFQPSFL 268
            .::|:||.||||..||||:::|:||  |.....|||.|:||||:||.:.::.|..|||||.|..:
Human   202 ASDRKIVEDIKESFCYVAMNYEEEM--AKKPDCLEKVYQLPDGKVIQLHDQLFSCPEALFSPCHM 264

  Fly   269 GMESCGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP 333
            .:|:.||.:..:.||||||..:|...::|.:|:||:|.:||:..|:.|:|..:||:...:::|||
Human   265 NLEAPGIDKICFSSIMKCDTGLRNSFFSNIILAGGSTSFPGLDKRLVKDIAKVAPANTAVQVIAP 329

  Fly   334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            ||||.|||:|||||||||.||.|||:..|:.|.||.|||::||
Human   330 PERKISVWMGGSILASLSAFQDMWITAAEFKEVGPNIVHQRCF 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_524210.1 ASKHA_NBD_actin 7..371 CDD:466823 178/361 (49%)
ACTRT3NP_115876.3 ASKHA_NBD_actin_Arp-T1-3 7..363 CDD:466848 176/357 (49%)

Return to query results.
Submit another query.