DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and Actr1b

DIOPT Version :10

Sequence 1:NP_524210.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001034117.2 Gene:Actr1b / 316333 RGDID:1307380 Length:376 Species:Rattus norvegicus


Alignment Length:370 Identity:198/370 - (53%)
Similarity:278/370 - (75%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILSLKYPIE 73
            :|:|||||:.|||||||..|:..||:.||||:|..||.|..:.|.::|.:|:..||:|:::||:|
  Rat    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTIRYPME 76

  Fly    74 HGIITNWDDMEKVWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
            ||::.:|:|||::|.:.: .::|:...||||||||||||||..||||..::.|||||.||:::::
  Rat    77 HGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNVPALFISM 141

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            ||||||||:|||||:||||||||:|.||||||:|:||:|:|:|:||||::.||..:|.:.|..|.
  Rat   142 QAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGADFH 206

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK-SYELPDGQVITIGNERFRTPEALFQPS 266
            |:||.|:||.|||:.||::::.:::.|     ...|| .|.||||..:.:|..|||.||.||||.
  Rat   207 TSAEFEVVRTIKERACYLSINPQKDEA-----LETEKVQYTLPDGSTLDVGPARFRAPELLFQPD 266

  Fly   267 FLGMESCGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTIKIKII 331
            .:|.||.|:||.:..:|.|.|:|:|:.|::|.|||||:|::.|..||:..|:..|||..:||||.
  Rat   267 LVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIKIS 331

  Fly   332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            ||.||.||.||||||||||.||::||:||:||:|.|...:|||.|
  Rat   332 APQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_524210.1 ASKHA_NBD_actin 7..371 CDD:466823 194/363 (53%)
Actr1bNP_001034117.2 ASKHA_NBD_Arp1 9..375 CDD:466820 196/367 (53%)

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