DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and Actl6b

DIOPT Version :10

Sequence 1:NP_524210.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_006249182.1 Gene:Actl6b / 288563 RGDID:1307763 Length:444 Species:Rattus norvegicus


Alignment Length:446 Identity:155/446 - (34%)
Similarity:229/446 - (51%) Gaps:85/446 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEASALVVDNGSGMCKAGFAGDDAPR------------------AVFPSIVG--RPRHQGVMVGM 48
            :|..|||.|.||...:||:||:|.|:                  |.||:.||  .....|.:...
  Rat     9 DEVGALVFDIGSFSVRAGYAGEDCPKVSLPVPSPYPRGSDTLCQADFPTTVGLLAAEEGGGLELE 73

  Fly    49 GQKDCYVGDEAQSKRGIL---------------SLKYPIEHGIITNWDDMEKVWHHTFYNELRVA 98
            |:|:         |:|.:               .:..|:::|:|.:|:....:..||:...::..
  Rat    74 GEKE---------KKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSE 129

  Fly    99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 163
            |..||||::|||.|.:|.|||:|::|||.:|.||.::...|||:.:|:||:||:||||  |.:||
  Rat   130 PNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDS--GATHT 192

  Fly   164 --VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT---TTAEREIVRD-------IKEK 216
              :|:::||.|...|::..|||..::....::..|......   ..|.:|.||:       .|||
  Rat   193 TAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEK 257

  Fly   217 LCYVA------------LDFEQEMATAAASTSLEK--------SYELPDGQVITIGNERFRTPEA 261
            |..|:            .||:..:...:.|...|:        .||:|:|.....|.||.|.||.
  Rat   258 LPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEG 322

  Fly   262 LFQPS----FLGMESCGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEITALA 322
            ||.||    ..|....|:...|..||..||:|||..||.:.:::||.|:..|..||:.:|::...
  Rat   323 LFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKT 387

  Fly   323 PSTIKIKIIA---PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            |.::::|:||   ..|||:|.||||||||||.||||||||||||:|.|...|.|||
  Rat   388 PPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_524210.1 ASKHA_NBD_actin 7..371 CDD:466823 150/437 (34%)
Actl6bXP_006249182.1 ASKHA_NBD_Arp4_ACTL6-like 8..435 CDD:466846 150/436 (34%)

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