DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and arp9

DIOPT Version :10

Sequence 1:NP_524210.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_594356.1 Gene:arp9 / 2541540 PomBaseID:SPAC1071.06 Length:523 Species:Schizosaccharomyces pombe


Alignment Length:435 Identity:100/435 - (22%)
Similarity:161/435 - (37%) Gaps:122/435 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 DCYVGDEAQSKRGILSLKYPIEHGIITNWDDMEKVWHHTFYNELRVAPEE----HPVLLTEAPLN 112
            :|.|.|.......|    .||:.|.:.:|:.::..|.| .|:.|...|.:    :||.|......
pombe    98 ECKVDDFTPLPNEI----QPIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYW 157

  Fly   113 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 177
            ...:||..||..||....|...:|.:.::.|||.|...|:|:|.|...:...||.:|..:..|..
pombe   158 SLYDRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQ 222

  Fly   178 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE---------KLCYVALDFEQEMA---- 229
            :|.|.||.:|.:|..:|.|...:..::.:.....||.|         ::..|..| ||:.|    
pombe   223 QLPLGGRYMTQHLQNLLRESLPTLKSSGQYVSKEDITELFAEQVKCSEIAQVVRD-EQDTAKDPV 286

  Fly   230 TAAASTS----------------------------------LEKSYELPDG-----QVITI---- 251
            .|..||:                                  .||. |.||.     |.|.|    
pombe   287 KALTSTNNVEEEDPAEDIGKIIASGQTRAYLAQKEREKNGESEKD-EKPDNTDVEFQTIAIEPLG 350

  Fly   252 ----GNERFRTPEALF-QPSFLGMESCGIHETVYQSIMK--CDVDIRKDLYANNVLSGGTTMYPG 309
                |.|||:..|.:| :||   .|:..:.|.:|.:|..  .:...|.||:.|.::.|..:...|
pombe   351 DCIVGRERFKICEPIFHRPS---NETVSLPEAIYITIKNYAANYKRRNDLWENIIVLGCGSRIRG 412

  Fly   310 IADRMQKEI-------------------------TALAPSTIKIKI----IAP---PERKYS--- 339
            ..:.:.:::                         |.:.|:.....|    |.|   |..|..   
pombe   413 FRECLIQQLQFKYQLSGSLEPYYAAQGTDSILGMTTMPPTPYPALINPCKILPDYFPSWKPDAGT 477

  Fly   340 -------VWIGGSILASLS---TFQQMWISKQEYDESGPGIVHRK 374
                   .::||||:|..|   :....:::.:||.:.||..:|.|
pombe   478 NAMFEELAFLGGSIVAKTSFNESVSSHYVTLEEYAQHGPTAIHTK 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_524210.1 ASKHA_NBD_actin 7..371 CDD:466823 98/430 (23%)
arp9NP_594356.1 ASKHA_NBD_ScArp9-like 8..522 CDD:466814 99/433 (23%)

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