DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and arp-1

DIOPT Version :10

Sequence 1:NP_524210.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_497108.2 Gene:arp-1 / 175162 WormBaseID:WBGene00013168 Length:374 Species:Caenorhabditis elegans


Alignment Length:369 Identity:197/369 - (53%)
Similarity:266/369 - (72%) Gaps:6/369 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILSLKYPIE 73
            :|:|||||:.||||||:..|:..|.:.||||::..||.|....|.::|.:|:|.||:.|::||:|
 Worm    11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPME 75

  Fly    74 HGIITNWDDMEKVWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
            |||:.||.||||:|.:.| .::|::.|||||||||:|||||..|||:..:|.|||||.||:|:.:
 Worm    76 HGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQM 140

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            ||||||||:|||||:||||||||:|.|||.:|:|:.|||.|:||||||:|:||..:|...||.|.
 Worm   141 QAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFH 205

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRTPEALFQPSF 267
            .:.|.||||::||..||:|||     .|...:.|::.||.|||...|.|.|..||.||.||:|..
 Worm   206 RSNEFEIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDL 265

  Fly   268 LGMESCGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIA 332
            :|.|..|:...|.|||||||||:|:.||:|.|||||||::.|..||:..|:..:||:..||:|.|
 Worm   266 IGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISA 330

  Fly   333 PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            ..||....||||||:|||.||::||:.|:||::.|...:|::.|
 Worm   331 SQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_524210.1 ASKHA_NBD_actin 7..371 CDD:466823 195/362 (54%)
arp-1NP_497108.2 ASKHA_NBD_Arp1 8..373 CDD:466820 196/366 (54%)

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