DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycH and CCNT1

DIOPT Version :10

Sequence 1:NP_524207.1 Gene:CycH / 40429 FlyBaseID:FBgn0022936 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001231.2 Gene:CCNT1 / 904 HGNCID:1599 Length:726 Species:Homo sapiens


Alignment Length:299 Identity:60/299 - (20%)
Similarity:109/299 - (36%) Gaps:75/299 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SQKRSWTFANEGQLMEFRVEQNS---KYIESHEEEAQGRDLNEHFLTSAEERLLLKQYEIYLFDF 67
            :..:.|.|..| ||      :||   ::....::|...|....:.|....:||.:.|        
Human     7 NNNKRWYFTRE-QL------ENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQ-------- 56

  Fly    68 CRRFEPTMPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSINQFV------ 126
                      ..:.||..|..|||:..|...:....:....:|:|.||||....:...:      
Human    57 ----------LTINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTC 111

  Fly   127 ----NNIKGDRNKA-----TDIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIK-TRSNMQNPD 181
                .::...|::|     .|:|:. |.:::..|.:.|||.:|...:      :| |:....:.|
Human   112 LHPQESLPDTRSEAYLQQVQDLVIL-ESIILQTLGFELTIDHPHTHV------VKCTQLVRASKD 169

  Fly   182 RLRPHIDSFIDSTYYSDACLLHTPSQIALAAVLHAASREQ--------------ENLDSYVT-DL 231
            ..:.......:|.:.:...|.:||..:|...: |.|.:..              |.:|:.|| :|
Human   170 LAQTSYFMATNSLHLTTFSLQYTPPVVACVCI-HLACKWSNWEIPVSTDGKHWWEYVDATVTLEL 233

  Fly   232 L------FVSAREKLPGLIDAVRKIRI--MVKQYQQPDR 262
            |      |:...||.|..:..:...|.  ..|:.:..||
Human   234 LDELTHEFLQILEKTPNRLKRIWNWRACEAAKKTKADDR 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycHNP_524207.1 ccl1 2..307 CDD:129660 60/299 (20%)
CCNT1NP_001231.2 CYCLIN_CCNT1_rpt1 10..147 CDD:410298 32/162 (20%)
CYCLIN_CCNT1_rpt2 151..259 CDD:410300 21/114 (18%)
Nuclear localization signal, and interaction with Tat-TAR RNA. /evidence=ECO:0000305|PubMed:9491887 253..270 2/16 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 360..385
Histidine-rich domain (HRD). /evidence=ECO:0000269|PubMed:29849146, ECO:0000269|PubMed:35393539 480..550
Disordered. /evidence=ECO:0000269|PubMed:29849146 487..650
Required for interaction with ZMYND8. /evidence=ECO:0000269|PubMed:30134174 527..570
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 688..726
Blue background indicates that the domain is not in the aligned region.

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