Protein Alignment CycH and AT5G48640

DIOPT Version :10

• Sequence 1: NP_524207.1
• Gene: CycH / 40429
• FlyBaseID: FBgn0022936
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_199675.2
• Gene: AT5G48640 / 834921
• AraportID: AT5G48640
• Length: 253
• Species: Arabidopsis thaliana
• Alignment Length: 200
• Identity: 58/200 - (28%)
• Similarity: 99/200 - (49%)
• Gaps: 17/200 - (8%)

  Fly    79 VVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSINQFVNNIK----GDRNK--AT 137
            ||.||..|.:|.|:..|.:::.|:.:..||:::|.|.||..|.....|..||    .:.||  ..
plant    61 VVATAITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEESIVQARNLVFYIKRLYPDEYNKYELK 125

  Fly   138 DIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIKTRSNMQNPDRLRPHIDSFIDSTYYSDACLL 202
            || |..|:.::..|:|||.:.:|:|.:..||.|  ...|..|.:::...|   ::.||..|..|:
plant   126 DI-LGMEMKVLEALDYYLVVFHPYRSLSEFLQD--AALNDVNMNQITWGI---VNDTYKMDLILV 184

  Fly   203 HTPSQIALAAVLHAASREQENLDSYVTDLLFVSAREKLPGLIDAVRKIRIMVKQYQQPDREKVKA 267
            |.|.:||||.:..|:...::::.::..||     .|.:..:.:...:|....:.|:....|||.:
plant   185 HPPYRIALACIYIASVHREKDITAWFEDL-----HEDMNLVKNIAMEILDFYENYRTITEEKVNS 244

  Fly   268 IEKKL 272
            ...||
plant   245 AFSKL 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycH	NP_524207.1	ccl1	2..307	CDD:129660	57/199 (29%)
AT5G48640	NP_199675.2	CYCLIN_AtCycC_rpt1	35..141	CDD:410274	26/80 (33%)
		CYCLIN_AtCycC_rpt2	146..249	CDD:410275	27/112 (24%)