Protein Alignment CycH and ccnl2

DIOPT Version :10

• Sequence 1: NP_524207.1
• Gene: CycH / 40429
• FlyBaseID: FBgn0022936
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: XP_012822126.1
• Gene: ccnl2 / 595011
• XenbaseID: XB-GENE-956522
• Length: 501
• Species: Xenopus tropicalis
• Alignment Length: 245
• Identity: 42/245 - (17%)
• Similarity: 96/245 - (39%)
• Gaps: 52/245 - (21%)

  Fly    75 MPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSINQFVNNIK-----GDRN 134
            :|:..:.|....|:||:...|.:.:..:.:...||.:|.|:||....|...:|...     .::.
 Frog    77 LPQVAMATGQVLFQRFFYTKSFVKHSMEHVAMACVHLASKIEEAPRRIRDVINVFHRLRQLREKQ 141

  Fly   135 KATDIVLSNELL------------LIGQLNYYLTIHNPFRPIEGFLIDIKTRSNMQNPDRLRPHI 187
            |:|.::|..|.:            ::.:|.:.:.:.:|.:.|..:|..::...|        .|:
 Frog   142 KSTPLILDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERN--------KHL 198

  Fly   188 D----SFIDSTYYSDACLLHTPSQIALAAVLHAASREQENLDSYVTDLLFVSAREKLPGLIDAVR 248
            .    ::::.:..:|..:...|..||.|.:..||...:..|.:.........|.|      :.::
 Frog   199 VQTSWNYMNDSLRTDVFVRFNPETIACACIFLAARTLEIPLPNRPHWFYLFGASE------EDIK 257

  Fly   249 KIRIMVKQYQQPDREKVKAIEKKLDKCRNQANNPDSELYKERLRRLYTDE 298
            :|.:.:.:.....:..|..:|.|::|                 |:|:.:|
 Frog   258 EICLQILRLYTRKKADVALLENKVEK-----------------RKLFIEE 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycH	NP_524207.1	ccl1	2..307	CDD:129660	42/245 (17%)
ccnl2	XP_012822126.1	CYCLIN_SF	18..173	CDD:477360	19/95 (20%)
		CYCLIN_CCNL2_rpt2	178..300	CDD:410296	23/144 (16%)