Protein Alignment CycH and Ccnk

DIOPT Version :10

• Sequence 1: NP_524207.1
• Gene: CycH / 40429
• FlyBaseID: FBgn0022936
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_001103142.1
• Gene: Ccnk / 500715
• RGDID: 1595690
• Length: 589
• Species: Rattus norvegicus
• Alignment Length: 189
• Identity: 46/189 - (24%)
• Similarity: 81/189 - (42%)
• Gaps: 30/189 - (15%)

  Fly    48 LTSAEERLLLKQYEIYLFDFCRRFEPTMPKCVVGTAFHYFKRFYLNNSPMDYHPKEIL-ATCVFV 111
            |..|.|....::...::||...|.  .:....:.|...||.|||:.:|...: |:.:. |.|:|:
  Rat    41 LDPATEARYRREGARFIFDVGTRL--GLHYDTLATGIIYFHRFYMFHSFKQF-PRYVTGACCLFL 102

  Fly   112 ACKVEEF----------------NVSINQFVNNIKGDRNKATDIVLSNELLLIGQLNYYLTIHNP 160
            |.||||.                :|...||     ||..|...:||  |.:|:..:.:.|.:.:|
  Rat   103 AGKVEETPKKCKDIIKTARSLLNDVQFGQF-----GDDPKEEVMVL--ERILLQTIKFDLQVEHP 160

  Fly   161 FRPIEGFLIDIKTRSNMQNPDRLRPHIDSFIDSTYYSDACLLHTPSQIALAAVLHAASR 219
            ::.:..:...:|...|  ...:|.....:|::.:..:...|...|..||: ||::.|.|
  Rat   161 YQFLLKYAKQLKGDKN--KIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAV-AVMYLAGR 216

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycH	NP_524207.1	ccl1	2..307	CDD:129660	46/189 (24%)
Ccnk	NP_001103142.1	CYCLIN_CCNK_rpt1	40..154	CDD:410233	32/122 (26%)
		CYCLIN_CCNK_rpt2	158..258	CDD:410234	13/62 (21%)