Protein Alignment CycH and CycC

DIOPT Version :10

• Sequence 1: NP_524207.1
• Gene: CycH / 40429
• FlyBaseID: FBgn0022936
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_476848.1
• Gene: CycC / 41801
• FlyBaseID: FBgn0004597
• Length: 267
• Species: Drosophila melanogaster
• Alignment Length: 294
• Identity: 72/294 - (24%)
• Similarity: 121/294 - (41%)
• Gaps: 65/294 - (22%)

  Fly     5 SSQKRSWTFANEGQLMEFRVEQNSKYIESHEEEAQGRDLNEHFLTSAE------ERLLLKQYEIY 63
            ||..:.|.......|.    |:....:..:|:|.|     :.|:..|.      |:|.|:|.
  Fly     8 SSHSQQWILDKPDLLR----ERQHDLLALNEDEYQ-----KVFIFFANVIQVLGEQLKLRQQ--- 60

  Fly    64 LFDFCRRFEPTMPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSINQFVNN 128
                           |:.||..||||||..||..:..|..:..||:.:|.|||||.|..|..:.:
  Fly    61 ---------------VIATATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLIS 110

  Fly   129 IKGDRNKA-------------TDIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIKTRSNMQNP 180
            |.....|.             |:.:|..|..|:..|:..|.::.|:||:      ::...:|...
  Fly   111 ICQSAIKTKFSYAYAQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPL------LQLVQDMGQE 169

  Fly   181 DRLRPHIDSFIDSTYYSDACLLHTPSQIALAAVLHAASREQENLDSYVTDLLFVSAREKLPGLID 245
            |:|.......::.:..:|.|||:.|.|||:|.:..|....|::    .|...|......|    |
  Fly   170 DQLLTLSWRIVNDSLRTDVCLLYPPYQIAIACLQIACVILQKD----ATKQWFAELNVDL----D 226

  Fly   246 AVRKI-RIMVKQYQ----QPDREKVKAIEKKLDK 274
            .|::| |.:|..|:    ..::::::.:..|:.|
  Fly   227 KVQEIVRAIVNLYELWKDWKEKDEIQMLLSKIPK 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycH	NP_524207.1	ccl1	2..307	CDD:129660	72/294 (24%)
CycC	NP_476848.1	CYCLIN_CCNC_rpt1	40..146	CDD:410217	34/123 (28%)
		CYCLIN_CCNC_rpt2	154..245	CDD:410218	26/104 (25%)