Protein Alignment CycH and Ccnt1

DIOPT Version :10

• Sequence 1: NP_524207.1
• Gene: CycH / 40429
• FlyBaseID: FBgn0022936
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_001399552.1
• Gene: Ccnt1 / 315291
• RGDID: 1311151
• Length: 724
• Species: Rattus norvegicus
• Alignment Length: 354
• Identity: 71/354 - (20%)
• Similarity: 124/354 - (35%)
• Gaps: 106/354 - (29%)

  Fly     6 SQKRSWTFANEGQLMEFRVEQNS---KYIESHEEEAQGRDLNEHFLTSAEERLLLKQYEIYLFDF 67
            :..:.|.|..| ||      :||   ::....::|...|....:.|....:||.:.|
  Rat     7 NNNKRWYFTRE-QL------ENSPSRRFGVDSDKELSYRQQAANLLQDMGQRLNVSQ-------- 56

  Fly    68 CRRFEPTMPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSINQFV------ 126
                      ..:.||..|..|||:..|...:|...:....:|:|.||||....:...:
  Rat    57 ----------LTINTAIVYMHRFYMIQSFTQFHRYSMAPAALFLAAKVEEQPKKLEHVIKVAHTC 111

  Fly   127 ----NNIKGDRNKA-----TDIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIK-TRSNMQNPD 181
                .::...|::|     .|:|:. |.:::..|.:.|||.:|...:      :| |:....:.|
  Rat   112 LHPQESLPDTRSEAYLQQVQDLVIL-ESIILQTLGFELTIDHPHTHV------VKCTQLVRASKD 169

  Fly   182 RLRPHIDSFIDSTYYSDACLLHTPSQIALAAVLHAASREQ--------------ENLDSYVT-DL 231
            ..:.......:|.:.:...|.:||..:|...: |.|.:..              |.:|:.|| :|
  Rat   170 LAQTSYFMATNSLHLTTFSLQYTPPVVACVCI-HLACKWSNWEIPVSTDGKHWWEYVDATVTLEL 233

  Fly   232 L------FVSAREKLPGLIDAVRKIRIMVKQYQQPDREKVKAIEKKLDKCRNQANNPDSELYKER 290
            |      |:...||.|..:..:|..|    .||...:.|                 ||..
  Rat   234 LDELTHEFLQILEKTPSRLKRIRNWR----AYQAAMKTK-----------------PDDR----- 272

  Fly   291 LRRLYTDEDDMPAEDASFH-IADVSSDTS 318
                  ..|:..:|....: |:..||||:
  Rat   273 ------GADENTSEQTILNMISQTSSDTT 295

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycH	NP_524207.1	ccl1	2..307	CDD:129660	66/340 (19%)
Ccnt1	NP_001399552.1	CYCLIN_SF	10..147	CDD:477360	33/162 (20%)
		CYCLIN_CCNT1_rpt2	151..259	CDD:410300	22/114 (19%)