Protein Alignment CycH and lsc1

DIOPT Version :10

• Sequence 1: NP_524207.1
• Gene: CycH / 40429
• FlyBaseID: FBgn0022936
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_001417959.1
• Gene: lsc1 / 2540879
• PomBaseID: SPBC530.13
• Length: 331
• Species: Schizosaccharomyces pombe
• Alignment Length: 279
• Identity: 56/279 - (20%)
• Similarity: 89/279 - (31%)
• Gaps: 99/279 - (35%)

  Fly    81 GTAFHYFKRFYL----NNSPMDYHPKEILATCVFVACKVEEFNVSINQFVNNIKGDRNKATDIVL 141
            |.|...:.||.|    |..|:    .|....|:.||.|:|:              ...|..||:|
pombe    60 GLAMLLYSRFQLFFPVNEIPL----LECATACLVVASKIED--------------TAKKFRDILL 106

  Fly   142 SNELLLIGQLNYYLTIHNPFRPIEGFLIDIKTRSNMQNPDRL------------------RPH-- 186
            :          :||..|      .|..:|..::...:|..|:                  .||
pombe   107 A----------HYLQKH------PGSEVDAHSQLIEENKKRILGLERMTLELICFDFRVRHPHNY 155

  Fly   187 IDSFIDSTYYS--------DAC--------LLHTPSQIALAAVLHAASREQENLDSYVTDLLFVS 235
            :..|..|..:|        :.|        :|..|:.|...|.:..|.:.|:.....:....|..
pombe   156 MVKFAKSLKFSSSTASIAWNVCTDAYKTYTMLKYPAHIVAVASISIACKLQQLPQPIIPRSFFAP 220

  Fly   236 AREKLPGLIDAVRKIRIMVKQYQQPDR--EKVKAIEKKLDKC----RNQAN----------NPDS 284
                 |.|.:||....:.:..:.||..  ..:...||.|..|    |.|.|          :|.|
pombe   221 -----PALTEAVIADILDLYMHYQPHTCIGNMYTTEKLLGLCVDFQRAQKNSGRPQKPPQIDPHS 280

  Fly   285 ----ELYKERLRRLYTDED 299
                :.|:|..:||...::
pombe   281 SSLADEYRESNKRLQESKE 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycH	NP_524207.1	ccl1	2..307	CDD:129660	56/279 (20%)
lsc1	NP_001417959.1	CCL1	1..307	CDD:227640	56/279 (20%)