Protein Alignment CycH and cyh-1

DIOPT Version :10

• Sequence 1: NP_524207.1
• Gene: CycH / 40429
• FlyBaseID: FBgn0022936
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_001379352.1
• Gene: cyh-1 / 190078
• WormBaseID: WBGene00021714
• Length: 337
• Species: Caenorhabditis elegans
• Alignment Length: 186
• Identity: 39/186 - (20%)
• Similarity: 63/186 - (33%)
• Gaps: 52/186 - (27%)

  Fly   108 DTCTVRRSQPSNHRLHEQQQ-------------------------HTTNATQT---ASTAENNEN 144
            :.|.|||.:..:..|....|                         |..|:..|   .|.....|.
 Worm     3 EACRVRRMKLGSQGLEVSAQGLGCMALSARYGAPKPETDAIALLHHAINSGVTFFDTSDMYGPET 67

  Fly   145 GDLSIGPILPGHPLQRRQSPPSEQQPSTLLYPFVTNGSI-ELQLLPSR-NCADETSLS-LSIGTM 206
            .:|.:|..|       :.....:.:.:|....|:..|.| |::..|.. ..|.|.||. |.|..:
 Worm    68 NELLLGKAL-------KDGVKEKVELATKFGFFIVEGEISEVRGDPEYVRAACEASLKRLDIACI 125

  Fly   207 DQKTMSEVEKKSYEKGETSLEREEARRETKRQIEIAELEF-----AEAKRIRQ-HA 256
            |......:        :|.:..|...||.|:.:|..::::     |.|..||: ||
 Worm   126 DLYYQHRI--------DTRVPIEITMRELKKLVEEGKIKYIGLSEASASTIRRAHA 173

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycH	NP_524207.1	ccl1	2..307	CDD:129660	39/186 (21%)
cyh-1	NP_001379352.1	CYCLIN_CCNH_rpt1	3..157	CDD:410228	33/168 (20%)
		CYCLIN_CCNH_rpt2	160..310	CDD:410229	6/14 (43%)