DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycH and CycH

DIOPT Version :10

Sequence 1:NP_524207.1 Gene:CycH / 40429 FlyBaseID:FBgn0022936 Length:324 Species:Drosophila melanogaster
Sequence 2:XP_061514127.1 Gene:CycH / 1277560 VectorBaseID:AGAMI1_013093 Length:333 Species:Anopheles gambiae


Alignment Length:328 Identity:215/328 - (65%)
Similarity:265/328 - (80%) Gaps:12/328 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYPVSSQKRSWTFANEGQLMEFRVEQNSKYIESH-----EEEAQGRDLNEHFLTSAEERLLLKQY 60
            ||.:||||:.|||..|.:|.|.||:||.::|..|     ||:.|.     |||::.|||||||||
Mosquito     1 MYSLSSQKKFWTFKTEQELAELRVKQNVRFIAKHGASMTEEQRQA-----HFLSADEERLLLKQY 60

  Fly    61 EIYLFDFCRRFEPTMPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSINQF 125
            |:.|.:||:||||.|||.|||||||||||||||||.|||||||||||||::|||||||||||.||
Mosquito    61 ELQLKEFCKRFEPPMPKYVVGTAFHYFKRFYLNNSSMDYHPKEILATCVYLACKVEEFNVSIAQF 125

  Fly   126 VNNIKGDRNKATDIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIKTRSNMQNPDRLRPHIDSF 190
            |.||||||.||.||:|||||||:.:||||||||||.|||||||||||||.||.|||||||.|:.|
Mosquito   126 VANIKGDRVKAMDIILSNELLLMQELNYYLTIHNPMRPIEGFLIDIKTRCNMSNPDRLRPGIEDF 190

  Fly   191 IDSTYYSDACLLHTPSQIALAAVLHAASREQENLDSYVTDLLFVSAREKLPGLIDAVRKIRIMVK 255
            ||.|:.:||.|::.||||||||||||||:||||||||||:.||.||::|||.||:|||::|.||:
Mosquito   191 IDKTFLTDAPLMYAPSQIALAAVLHAASKEQENLDSYVTESLFGSAKDKLPVLIEAVRRVRSMVR 255

  Fly   256 QYQQPDREKVKAIEKKLDKCRNQANNPDSELYKERLRRLYTDEDDMPAEDASFH--IADVSSDTS 318
            ..:.|.:::|:.:||||:|||||.|||||::||:|::::|.||||:....:|:|  ::|.|.|.|
Mosquito   256 TIELPPKDRVRFLEKKLEKCRNQENNPDSQIYKQRMKKMYEDEDDLDVMGSSYHMNVSDASLDVS 320

  Fly   319 AMN 321
            .:|
Mosquito   321 QLN 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycHNP_524207.1 ccl1 2..307 CDD:129660 207/309 (67%)
CycHXP_061514127.1 None

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