DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycH and Ccnt1

DIOPT Version :10

Sequence 1:NP_524207.1 Gene:CycH / 40429 FlyBaseID:FBgn0022936 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_033963.1 Gene:Ccnt1 / 12455 MGIID:1328363 Length:724 Species:Mus musculus


Alignment Length:354 Identity:71/354 - (20%)
Similarity:124/354 - (35%) Gaps:106/354 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SQKRSWTFANEGQLMEFRVEQNS---KYIESHEEEAQGRDLNEHFLTSAEERLLLKQYEIYLFDF 67
            :..:.|.|..| ||      :||   ::....::|...|....:.|....:||.:.|        
Mouse     7 NNNKRWYFTRE-QL------ENSPSRRFGVDSDKELSYRQQAANLLQDMGQRLNVSQ-------- 56

  Fly    68 CRRFEPTMPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSINQFV------ 126
                      ..:.||..|..|||:..|...:|...:....:|:|.||||....:...:      
Mouse    57 ----------LTINTAIVYMHRFYMIQSFTQFHRYSMAPAALFLAAKVEEQPKKLEHVIKVAHTC 111

  Fly   127 ----NNIKGDRNKA-----TDIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIK-TRSNMQNPD 181
                .::...|::|     .|:|:. |.:::..|.:.|||.:|...:      :| |:....:.|
Mouse   112 LHPQESLPDTRSEAYLQQVQDLVIL-ESIILQTLGFELTIDHPHTHV------VKCTQLVRASKD 169

  Fly   182 RLRPHIDSFIDSTYYSDACLLHTPSQIALAAVLHAASREQ--------------ENLDSYVT-DL 231
            ..:.......:|.:.:...|.:||..:|...: |.|.:..              |.:|:.|| :|
Mouse   170 LAQTSYFMATNSLHLTTFSLQYTPPVVACVCI-HLACKWSNWEIPVSTDGKHWWEYVDATVTLEL 233

  Fly   232 L------FVSAREKLPGLIDAVRKIRIMVKQYQQPDREKVKAIEKKLDKCRNQANNPDSELYKER 290
            |      |:...||.|..:..:|..|    .||...:.|                 ||..     
Mouse   234 LDELTHEFLQILEKTPSRLKRIRNWR----AYQAAMKTK-----------------PDDR----- 272

  Fly   291 LRRLYTDEDDMPAEDASFH-IADVSSDTS 318
                  ..|:..:|....: |:..||||:
Mouse   273 ------GADENTSEQTILNMISQTSSDTT 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycHNP_524207.1 ccl1 2..307 CDD:129660 66/340 (19%)
Ccnt1NP_033963.1 CYCLIN_SF 10..147 CDD:477360 33/162 (20%)
CYCLIN_CCNT1_rpt2 151..259 CDD:410300 22/114 (19%)
Nuclear localization signal. /evidence=ECO:0000255 253..270 5/37 (14%)
Histidine-rich domain (HRD). /evidence=ECO:0000250|UniProtKB:O60563 479..549
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 483..586
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 691..724
Blue background indicates that the domain is not in the aligned region.

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