Protein Alignment CycH and Ccnc

DIOPT Version :10

• Sequence 1: NP_524207.1
• Gene: CycH / 40429
• FlyBaseID: FBgn0022936
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: XP_063143131.1
• Gene: Ccnc / 114839
• RGDID: 70905
• Length: 318
• Species: Rattus norvegicus
• Alignment Length: 314
• Identity: 84/314 - (26%)
• Similarity: 131/314 - (41%)
• Gaps: 61/314 - (19%)

  Fly     5 SSQKRSWTFANEGQLMEFRVEQNSKYIESHEEEAQGRDLNEHFLTSAEERLLLKQYEIYLFDFCR 69
            ||....|....:..|.|  .:::.|:: |.||..:.:....:.:.:..|.|.|:|.
  Rat     8 SSHYLQWILDKQDLLKE--RQKDLKFL-SEEEYWKLQIFFTNVIQALGEHLKLRQQ--------- 60

  Fly    70 RFEPTMPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSIN----------- 123
                     |:.||..||||||...|.....|..:..||||:|.|||||.|..|
  Rat    61 ---------VIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAATTSVL 116

  Fly   124 --QFVNNIKGDRNKATDIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIKTRSNMQNPDRLRPH 186
              :|......:.....:.:|..|..|:..::..|.:::|:||:..::.|      |...|.|.|.
  Rat   117 KTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDVLLPL 175

  Fly   187 IDSFIDSTYYSDACLLHTPSQIALAAVLHAASREQENLDSYVTDLLFVSAREKLPGLIDAVRK-- 249
            ....::.||.:|.|||:.|..||||. ||.|...|:.           .||:....|...:.|
  Rat   176 AWRIVNDTYRTDLCLLYPPFMIALAC-LHVACVVQQK-----------DARQWFAELSVDMEKIL 228

  Fly   250 --IRIMVKQYQQ----PDREKVKAIEKKLDKCRNQANNPDSELYKERLRRLYTD 297
              ||:::|.|:|    .:|:::..|..|:.|.:...|...|.|..: |..||.|
  Rat   229 EIIRVILKLYEQWKNFDERKEMATILSKMPKPKPPPNRYISHLAAD-LILLYND 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycH	NP_524207.1	ccl1	2..307	CDD:129660	84/314 (27%)
Ccnc	XP_063143131.1	None