DRSC/TRiP Functional Genomics Resources

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Protein Alignment eg and PGR

DIOPT Version :10

Sequence 1:NP_524206.1 Gene:eg / 40428 FlyBaseID:FBgn0000560 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_000917.3 Gene:PGR / 5241 HGNCID:8910 Length:933 Species:Homo sapiens


Alignment Length:81 Identity:32/81 - (39%)
Similarity:44/81 - (54%) Gaps:11/81 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAG-----CKHNGDCVINKKNRTACKACR 62
            ::|.:||:.|:|.|:|..||..||.||.|      |:.|     |....||:::|..|..|.|||
Human   565 KICLICGDEASGCHYGVLTCGSCKVFFKR------AMEGQHNYLCAGRNDCIVDKIRRKNCPACR 623

  Fly    63 LRKCLLVGMSKSGSRY 78
            ||||...||...|.::
Human   624 LRKCCQAGMVLGGRKF 639

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
egNP_524206.1 NR_DBD_like 3..87 CDD:413390 32/81 (40%)