DRSC/TRiP Functional Genomics Resources

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Protein Alignment eg and esrrgb

DIOPT Version :10

Sequence 1:NP_524206.1 Gene:eg / 40428 FlyBaseID:FBgn0000560 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001122150.2 Gene:esrrgb / 407691 ZFINID:ZDB-GENE-040616-4 Length:444 Species:Danio rerio


Alignment Length:79 Identity:39/79 - (49%)
Similarity:50/79 - (63%) Gaps:3/79 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QLCKVCGEPAAGFHFGAFTCEGCKSFFGRT-YNNIAAIAGCKHNGDCVINKKNRTACKACRLRKC 66
            :||.|||:.|:|||:|..:||.||:||.|| ..||.  ..|..:.||.|.|:.|.:|:|||..||
Zfish   107 RLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIE--YSCSVSRDCEITKRRRKSCQACRFTKC 169

  Fly    67 LLVGMSKSGSRYGR 80
            |.|||.:.|.|..|
Zfish   170 LSVGMLREGVRLDR 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egNP_524206.1 NR_DBD_like 3..87 CDD:413390 39/79 (49%)
esrrgbNP_001122150.2 NR_DBD_ERR 105..199 CDD:143544 39/79 (49%)
NR_LBD_ERR 223..442 CDD:132744
Blue background indicates that the domain is not in the aligned region.

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