DRSC/TRiP Functional Genomics Resources

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Protein Alignment eg and ERR

DIOPT Version :10

Sequence 1:NP_524206.1 Gene:eg / 40428 FlyBaseID:FBgn0000560 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_648183.3 Gene:ERR / 38912 FlyBaseID:FBgn0035849 Length:496 Species:Drosophila melanogaster


Alignment Length:115 Identity:50/115 - (43%)
Similarity:66/115 - (57%) Gaps:23/115 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAG-----CKHNGDCVINKKNRTACKA 60
            :.:||.|||:.|:|||:|..:||.||:||.||      |.|     |..|.:|.|||:.|.||:|
  Fly   123 LRRLCLVCGDVASGFHYGVASCEACKAFFKRT------IQGNIEYTCPANNECEINKRRRKACQA 181

  Fly    61 CRLRKCLLVGMSKSGSRY-----GRR-------SNWFKIHCLLQEQQTTS 98
            ||.:||||:||.|.|.|.     ||:       ||.::...||.:..|||
  Fly   182 CRFQKCLLMGMLKEGVRLDRVRGGRQKYRRNPVSNSYQTMQLLYQSNTTS 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egNP_524206.1 NR_DBD_like 3..87 CDD:413390 45/100 (45%)
ERRNP_648183.3 NR_DBD_ERR 121..217 CDD:143544 44/99 (44%)
NR_LBD 237..493 CDD:472173
Blue background indicates that the domain is not in the aligned region.

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