DRSC/TRiP Functional Genomics Resources

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Protein Alignment eg and Esrrb

DIOPT Version :10

Sequence 1:NP_524206.1 Gene:eg / 40428 FlyBaseID:FBgn0000560 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001008516.3 Gene:Esrrb / 299210 RGDID:1359557 Length:510 Species:Rattus norvegicus


Alignment Length:79 Identity:38/79 - (48%)
Similarity:49/79 - (62%) Gaps:3/79 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QLCKVCGEPAAGFHFGAFTCEGCKSFFGRT-YNNIAAIAGCKHNGDCVINKKNRTACKACRLRKC 66
            :||.|||:.|:|:|:|..:||.||:||.|| ..||.  ..|....:|.|.|:.|.:|:|||..||
  Rat   178 RLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIE--YSCPATNECEITKRRRKSCQACRFMKC 240

  Fly    67 LLVGMSKSGSRYGR 80
            |.|||.|.|.|..|
  Rat   241 LKVGMLKEGVRLDR 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egNP_524206.1 NR_DBD_like 3..87 CDD:413390 38/79 (48%)
EsrrbNP_001008516.3 NR_DBD_ERR 175..270 CDD:143544 38/79 (48%)
NR_LBD_ERR 289..508 CDD:132744
Blue background indicates that the domain is not in the aligned region.

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