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Protein Alignment eg and NR3C1

DIOPT Version :10

Sequence 1:	NP_524206.1	Gene:	eg / 40428	FlyBaseID:	FBgn0000560	Length:	373	Species:	Drosophila melanogaster
Sequence 2:	NP_001019265.1	Gene:	NR3C1 / 2908	HGNCID:	7978	Length:	778	Species:	Homo sapiens

Alignment Length:	333	Identity:	82/333 - (24%)
Similarity:	120/333 - (36%)	Gaps:	96/333 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 QLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHN------GDCVINKKNRTACKAC 61
            :||.||.:.|:|.|:|..||..||.||.|      |:.|.:||      .||:|:|..|..|.||
Human   419 KLCLVCSDEASGCHYGVLTCGSCKVFFKR------AVEGRQHNYLCAGRNDCIIDKIRRKNCPAC 477

  Fly    62 RLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQTTSGLGGGSSVGSGSGGGVSSASLEQL---- 122
            |.||||..||:....:..::....        ||.|:|:...:|...|: ..:..|:|.||
Human   478 RYRKCLQAGMNLEARKTKKKIKGI--------QQATTGVSQETSENPGN-KTIVPATLPQLTPTL 533

  Fly   123 -ARLQQASNQARQTYQDKTNPCIKSATATTSPRIEGAAVGTGI-GGGASPSFLQAAKLHHQRQLK 185
             :.|:....:......|.:.|.......||...:.|..|...: ...|.|.|         |.|.
Human   534 VSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGF---------RNLH 589

  Fly   186 LDSRLSNTPSDSGASSAGDPNEDGVTSV-----------LGGQIATPSSTNATSLPKLDLRHPNF 239
            ||                    |.:|.:           ||.:....||.|....
Human   590 LD--------------------DQMTLLQYSWMFLMAFALGWRSYRQSSANLLCF---------- 624

  Fly   240 PATSEPDADMQRQRH---------QELLEIFRSHSEPLYSSFAPFSHLPPVLLAAGVPQLPIFKD 295
                .||..:..||.         :.:|.: .|....|..|:..:..:..:||.:.||     ||
Human   625 ----APDLIINEQRMTLPCMYDQCKHMLYV-SSELHRLQVSYEEYLCMKTLLLLSSVP-----KD 679

  Fly   296 QFKAELLF 303
            ..|::.||
Human   680 GLKSQELF 687

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.