DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eg and esr1

DIOPT Version :10

Sequence 1:NP_524206.1 Gene:eg / 40428 FlyBaseID:FBgn0000560 Length:373 Species:Drosophila melanogaster
Sequence 2:XP_009297713.1 Gene:esr1 / 259252 ZFINID:ZDB-GENE-020806-5 Length:613 Species:Danio rerio


Alignment Length:209 Identity:56/209 - (26%)
Similarity:89/209 - (42%) Gaps:61/209 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QLCKVCGEPAAGFHFGAFTCEGCKSFFGRT---YNNIAAIAGCKHNGDCVINKKNRTACKACRLR 64
            :.|.||.:.|:|:|:|.::|||||:||.|:   :|:..    |.....|.|::..|.:|:|||||
Zfish   194 RFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYV----CPATNQCTIDRNRRKSCQACRLR 254

  Fly    65 KCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQTTSGLGGGSSVGSGSGGGVSSASLEQLARLQQAS 129
            ||..|||.|.|.|..|                     ||.||               ....:::|
Zfish   255 KCYEVGMMKGGIRKDR---------------------GGRSV---------------RRERRRSS 283

  Fly   130 NQARQTYQDKTNPCIKSATATTSP-----RIEGAAVGTGIGG---------GASPSFLQAAKLHH 180
            |:.|.  :..::.|.::...||.|     :..|..|.|....         ||.|..:.:.:.|.
Zfish   284 NEDRD--KSTSDQCSRAGVRTTGPQDKRKKRSGGVVSTLCMSPDQVLLLLLGAEPPAVCSRQKHS 346

  Fly   181 Q--RQLKLDSRLSN 192
            :  .::.:.|.|:|
Zfish   347 RPYTEITMMSLLTN 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egNP_524206.1 NR_DBD_like 3..87 CDD:413390 35/86 (41%)
esr1XP_009297713.1 Oest_recep 45..>143 CDD:460469
NR_DBD_ER 191..269 CDD:143545 34/78 (44%)
NR_LBD_ER 322..559 CDD:132747 7/39 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.