DRSC/TRiP Functional Genomics Resources

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Protein Alignment eg and Esr2

DIOPT Version :10

Sequence 1:NP_524206.1 Gene:eg / 40428 FlyBaseID:FBgn0000560 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_997590.1 Gene:Esr2 / 13983 MGIID:109392 Length:567 Species:Mus musculus


Alignment Length:107 Identity:44/107 - (41%)
Similarity:61/107 - (57%) Gaps:20/107 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAG-----CKHNGDCVINKKNRTACKACRLR 64
            |.||.:.|:|:|:|.::|||||:||.|      :|.|     |.....|.|:|..|.:|:|||||
Mouse   168 CAVCSDYASGYHYGVWSCEGCKAFFKR------SIQGHNDYICPATNQCTIDKNRRKSCQACRLR 226

  Fly    65 KCLLVGMSKSGSRYGR---------RSNWFKIHCLLQEQQTT 97
            ||..|||.|.|||..|         ||...::|||.:.::|:
Mouse   227 KCYEVGMVKCGSRRERCGYRIVRRQRSASEQVHCLNKAKRTS 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egNP_524206.1 NR_DBD_like 3..87 CDD:413390 40/95 (42%)
Esr2NP_997590.1 ERbeta_N 31..144 CDD:463610
NR_DBD_ER 163..244 CDD:143545 38/81 (47%)
NR_LBD_ER 282..535 CDD:132747
Blue background indicates that the domain is not in the aligned region.

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