DRSC/TRiP Functional Genomics Resources

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Protein Alignment eg and Nr3c2

DIOPT Version :10

Sequence 1:NP_524206.1 Gene:eg / 40428 FlyBaseID:FBgn0000560 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001077375.1 Gene:Nr3c2 / 110784 MGIID:99459 Length:980 Species:Mus musculus


Alignment Length:337 Identity:86/337 - (25%)
Similarity:135/337 - (40%) Gaps:63/337 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAG-----CKHNGDCVINKKNRTACKAC 61
            :::|.|||:.|:|.|:|..||..||.||.|      |:.|     |....||:|:|..|..|.||
Mouse   600 SKICLVCGDEASGCHYGVVTCGSCKVFFKR------AVEGQHNYLCAGRNDCIIDKIRRKNCPAC 658

  Fly    62 RLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQ-------QTTSGLGGGSSVGSGSGGGVSSASL 119
            ||:|||..||: .|:|..::..  |:..|.:||       ...|...|.:.:.......|:||.:
Mouse   659 RLQKCLQAGMN-LGARKSKKLG--KLKGLHEEQPQQPPPPPPQSPEEGTTYIAPTKEPSVNSALV 720

  Fly   120 EQLARLQQASNQARQTYQDKTNPCIKSATATTSPRIEGAAVGTGIGGGASPSFLQAAKLHHQRQL 184
            .|||.:.:|...:.....:...|.|..|....|......::.:.:...|....:|..|     ..
Mouse   721 PQLASITRALTPSPSMILENIEPEIVYAGYDNSKPDTAESLLSTLNRLAGKQMIQVVK-----WA 780

  Fly   185 KLDSRLSNTPSDSGASSAGDPNEDGVTSVLGGQIATPSSTNATSLPKLDLRHPNFPATSE----- 244
            |:.....|.|.           ||.:|.:....:...|    .:|.....:|.|    |:     
Mouse   781 KVLPGFKNLPL-----------EDQITLIQYSWMCLSS----FALSWRSYKHTN----SQFLYFA 826

  Fly   245 PDADMQRQR-HQ----ELLEIFRSHS---EPLYSSFAPFSHLPPVLLAAGVPQLPIFKDQFKAEL 301
            ||.....:: ||    ||.:..|..|   ..|..:|..:|.:..:||.:.||     ||..|::.
Mouse   827 PDLVFNEEKMHQSAMYELCQGMRQISLQFVRLQLTFEEYSIMKVLLLLSTVP-----KDGLKSQA 886

  Fly   302 LFPTTSSPELEE 313
            .|....:..::|
Mouse   887 AFEEMRTNYIKE 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egNP_524206.1 NR_DBD_like 3..87 CDD:413390 35/88 (40%)
Nr3c2NP_001077375.1 Modulating 1..602 0/1 (0%)
Herpes_BLLF1 <200..>394 CDD:282904
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..331
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 353..372
NR_DBD_GR_PR 599..673 CDD:143546 34/79 (43%)
Hinge 669..721 11/54 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 683..708 5/24 (21%)
NR_LBD_MR 733..980 CDD:132760 38/195 (19%)
Important for coactivator binding. /evidence=ECO:0000250 778..781 1/7 (14%)
Blue background indicates that the domain is not in the aligned region.

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