Protein Alignment Syn1 and Pdzd11

DIOPT Version :9

• Sequence 1: NP_001262192.1
• Gene: Syn1 / 40424
• FlyBaseID: FBgn0037130
• Length: 627
• Species: Drosophila melanogaster
• Sequence 2: XP_038955522.1
• Gene: Pdzd11 / 302422
• RGDID: 1560007
• Length: 145
• Species: Rattus norvegicus
• Alignment Length: 95
• Identity: 32/95 - (33%)
• Similarity: 49/95 - (51%)
• Gaps: 11/95 - (11%)

  Fly   163 RHVRIIKSDNNGLGISIKGGRENRMPILISKIFRGMAADQAKGLYVGDAILTVNGEELRDATHD- 226
            |.|.:.|.....||.:|:||:.:::.|.|||:.....|.:| ||..||.:|.||..:.:|..|.
  Rat    46 RIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRA-GLQEGDQVLAVNDVDFQDIEHSK 109

  Fly   227 ----EAVRALKRSGRVVDLEVKFLREVTPY 252
                :||..|| :.|.:.:.|:|.    ||
  Rat   110 LCVFQAVEILK-TAREISMRVRFF----PY 134

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Syn1	NP_001262192.1	PH-like	30..>61	CDD:302622
		PDZ_signaling	163..244	CDD:238492	28/85 (33%)
		PHsplit_syntrophin	<293..351	CDD:269960
Pdzd11	XP_038955522.1	PDZ_signaling	45..130	CDD:238492	28/85 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3528
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900