DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syn1 and AgaP_AGAP007865

DIOPT Version :9

Sequence 1:NP_001262192.1 Gene:Syn1 / 40424 FlyBaseID:FBgn0037130 Length:627 Species:Drosophila melanogaster
Sequence 2:XP_317627.4 Gene:AgaP_AGAP007865 / 1278090 VectorBaseID:AGAP007865 Length:1707 Species:Anopheles gambiae


Alignment Length:526 Identity:97/526 - (18%)
Similarity:154/526 - (29%) Gaps:223/526 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 GSNHSGGGG------------------GGAGGGGTG----------------------------- 98
            |...|||||                  ||.||||||                             
Mosquito   924 GGGQSGGGGASASIANDALLSYPAAASGGGGGGGTGPAAMGHHSHGASMDYSAYRYSQIQSSKED 988

  Fly    99 -------GGGQNGTLPNSASLQGMNIQDTELDGSASNDNGDRDPCLNNNNNAGDG-----GGMDM 151
                   ||.:.||.|.:.|....|...........:..|.|.|...:..:.|.|     |.:| 
Mosquito   989 VPISGYTGGYEGGTFPRNKSHLTSNSNHHHHHHHHHHQGGFRIPSNQSVTSRGSGIKISNGSID- 1052

  Fly   152 CD----------------VPDHV-------ANQKR--------------HVRIIKSDNNGLGISI 179
            |.                .|.|.       .:.||              .:|:::.|.:.:.:.|
Mosquito  1053 CSSSERASPIPTFEVQVLKPGHAPPGGGGPGSNKRSSLQDYGHSKPNVGELRLVQIDKSEMSLGI 1117

  Fly   180 K-GGRENRMPILISKIFRGMAADQAKGLYVGDAILTVNGEELRDATHDEAVRALKRSGRVVDLEV 243
            | ..|.|...:.:|.:.....|.:. ||::||.:|.|.|..||.||::.|...|::.|..:.:.|
Mosquito  1118 KIFCRRNGGGVFVSNVGENSLASKV-GLHIGDQLLEVCGINLRKATYELAAHVLRQCGNSITMLV 1181

  Fly   244 KFLREVTPYFRKASIISEVGWELQRAFLCPLGPGVPTS-PPAPKTTPRADTRYIPLQLTHLARNL 307
            .:    .|........||              ..|..| .|.|:.:||:           :.|:|
Mosquito  1182 LY----NPVVYSNLTTSE--------------DNVARSGSPTPQNSPRS-----------MGRSL 1217

  Fly   308 KYIDPENRCFELHSPDGVHSCILRAADSAEALVWFNALHSAMGTSTQRALAEANRALTNLIGELK 372
                                  :.|.::...    ||:...|......:|.:|.    .....|:
Mosquito  1218 ----------------------ISAVNTTAV----NAMTGTMTAPKTSSLVKAQ----EFSDSLE 1252

  Fly   373 HIGWLSKRMSGGGSSGSAGGGAASGGSGTSNSVVAGELVSPSGRSSSESSDESDKWLPIFVAVTE 437
            |    ..::......||...|::..|.|.||                                  
Mosquito  1253 H----QTQLHDDEEDGSVAVGSSGVGGGQSN---------------------------------- 1279

  Fly   438 REFRIYESAPWSVEAWSRPLEIYALATTRLAGAGNNSSLNGQQTTVFCVRCGTARGVLVYWLRSE 502
                :|:         .:|.||| :.|.:.:..|  .:|.|          |.|.|:.|:.::.:
Mosquito  1280 ----MYK---------EQPREIY-IETRKTSNLG--ITLVG----------GNAYGIFVHGVQKD 1318

  Fly   503 THRDMA 508
            :..|.|
Mosquito  1319 SIADQA 1324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syn1NP_001262192.1 PH-like 30..>61 CDD:302622
PDZ_signaling 163..244 CDD:238492 23/95 (24%)
PHsplit_syntrophin <293..351 CDD:269960 6/57 (11%)
AgaP_AGAP007865XP_317627.4 SPEC 50..222 CDD:295325
PDZ_signaling 225..320 CDD:238492
PDZ_signaling <341..405 CDD:238492
PDZ 1102..1185 CDD:214570 23/87 (26%)
PDZ_signaling 1285..1364 CDD:238492 14/53 (26%)
SH3_DLG5 1382..1445 CDD:212794
Guanylate_kin 1524..1694 CDD:279019
NK <1559..1695 CDD:302627
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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