DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syn1 and AgaP_AGAP007108

DIOPT Version :9

Sequence 1:NP_001262192.1 Gene:Syn1 / 40424 FlyBaseID:FBgn0037130 Length:627 Species:Drosophila melanogaster
Sequence 2:XP_308649.4 Gene:AgaP_AGAP007108 / 1269994 VectorBaseID:AGAP007108 Length:879 Species:Anopheles gambiae


Alignment Length:458 Identity:106/458 - (23%)
Similarity:155/458 - (33%) Gaps:147/458 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PPAAQQPIPQQHSPSPSGLRCGNMETRVRGA----WYRVLVTLETDFLAVSLDESCEAAQPSNDG 71
            |.||..|........|        ||.|.|.    |.|:|     |...|            |||
Mosquito   119 PAAATGPFTDSPKSVP--------ETIVAGTGPADWSRIL-----DIELV------------NDG 158

  Fly    72 QSTTLN-GTLGSNHSG-------GGGGGAGGGGTGGGGQ-----NGTLPNSASLQ--------GM 115
              |.|. |.:|:..:|       .||.....|....|.|     :..|....|.|        |.
Mosquito   159 --TGLGFGIIGARTTGVTVKTILAGGVADRDGRLKSGDQILQIGDVNLHEMVSEQVASVLRQSGT 221

  Fly   116 NIQ-------DTELDGSASNDNGDRDPC------LNNNNNAGDGGGMDMCDV------------- 154
            ::|       |....|:...|:....|.      |.......|.|..|:..|             
Mosquito   222 HVQLVVARPIDPATVGTDEYDHSAIVPTVLLANPLKLKQYLSDSGFGDIYSVYSIANLDSPGLEN 286

  Fly   155 --------PDHVANQKRHVRIIKSDNNGLGISIKG---GRENRMPILISKIFRGMAADQAKGLYV 208
                    ||....:...|. ::.|.|||||:|.|   .:|....|.:..:..|.|||.:..:.|
Mosquito   287 PFRQESPLPDFPETEVFTVE-LRKDQNGLGITIAGYVCEKEELSGIFVKSVSPGSAADLSGKIQV 350

  Fly   209 GDAILTVNGEELRDATHDEAVRALKRSGRVVDLEV-KFLREVTPYFRKASIISEVGWELQRAFLC 272
            .|.|:.|:|:.|...::.:||..||:||.||.|.: ::||  .|.:.          :||:|...
Mosquito   351 NDRIIEVDGQSLHGFSNHQAVDVLKQSGHVVTLCLERYLR--GPKYD----------QLQQAIAA 403

  Fly   273 -PLGPGVPTSPPAPKTTPRADTRYIPLQLTHLARNLKYI-------------------DPENRCF 317
             .:.|..|.:||.|         .:|..|:....|:..|                   :|:::..
Mosquito   404 NEMKPPTPATPPPP---------LVPTDLSKYGSNILDILPPQALQRTLGLEQEQAAGEPDDQLA 459

  Fly   318 E----------LHSPDGVHSCILRAADSAEALVWFNALHSAMGTSTQRALAEANRAL--TNLIGE 370
            |          ||.  |.|..:.||.||.:...:.:.:..|. .....|:||....|  ||.:..
Mosquito   460 ECDVAGLDGGPLHM--GGHKKLSRAKDSIDTQEYRDKIKEAT-IVPDGAVAEDGTLLDATNPVAI 521

  Fly   371 LKH 373
            .:|
Mosquito   522 ARH 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syn1NP_001262192.1 PH-like 30..>61 CDD:302622 9/34 (26%)
PDZ_signaling 163..244 CDD:238492 30/84 (36%)
PHsplit_syntrophin <293..351 CDD:269960 15/86 (17%)
AgaP_AGAP007108XP_308649.4 PDZ_signaling 149..228 CDD:238492 21/97 (22%)
PDZ_signaling 302..383 CDD:238492 29/81 (36%)
PDZ_signaling 576..652 CDD:238492
PDZ 749..838 CDD:214570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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