DRSC/TRiP Functional Genomics Resources

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Protein Alignment Als2 and rsph10b

DIOPT Version :10

Sequence 1:NP_649347.1 Gene:Als2 / 40410 FlyBaseID:FBgn0037116 Length:1486 Species:Drosophila melanogaster
Sequence 2:NP_001070227.1 Gene:rsph10b / 767792 ZFINID:ZDB-GENE-060929-300 Length:731 Species:Danio rerio


Alignment Length:821 Identity:158/821 - (19%)
Similarity:284/821 - (34%) Gaps:280/821 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   676 GDSLR---LTTPE----KSFLVSTRSQEMRKVWLD-----QLQSSIIASL---------GKPLGS 719
            ||:::   .:|||    |:.:.|:.|..:.:..::     .|.||.:.|.         .:|:|.
Zfish     4 GDNMKSSNKSTPEPTLSKTLVESSTSSLLSESVVEPEDGQDLSSSAVCSASTVSLPPNENQPIGE 68

  Fly   720 -----PVPSYRSTGYEFSREHPKFSRVKACGTWRKGVLHGNCYLEYPDGSVYCGELQHGIIEGFG 779
                 .||...|...|      ::...| ||.    :.||.....:..|.||.|...||::.|:|
Zfish    69 HDRCRTVPVLHSIIVE------RYEGEK-CGE----MFHGEGVAYFQGGHVYKGSFSHGLMHGYG 122

  Fly   780 KMVIPTTGLYVGNFKGGRFHGHGVYEMHCKDSPESEVYEGNFCEGLFHGHG---------VMRNN 835
            :.:......|.|:||.....|||.|..     .....|||...:|:.||.|         |.|..
Zfish   123 EYIWSDGLKYQGDFKVNVPMGHGTYTW-----LNGSTYEGEVHQGIRHGVGMYKCVKTLTVYRGQ 182

  Fly   836 RYI------------------YVGEYQANARSGYGVIEDLVSGDKYMGMFADNKRSGIGSCITNR 882
            .|:                  |.||:..|.|.|:|. ....||:.|.|.:.:|.|.|.|   |.|
Zfish   183 WYLGKRQGQGEMFYNQEATSWYKGEWVNNCREGWGK-RCYPSGNVYEGQWRNNVRHGEG---TMR 243

  Fly   883 GDYFEGSFSGDDLTGSGVAVFENDYY--------------YEGELTLLGPNGRGEYYMPSGDACG 933
            ....:..:||..:.|.......:.::              |.|:......:|:|::..       
Zfish   244 WIDLDQQYSGQWINGIQEGKGTHTWFRKRAPSSQYPRMNEYTGDFVQAMRHGQGQFLY------- 301

  Fly   934 GSGAMGTGEFDDTCELIGNKMFGQLSGTWDTVRIQAGELVLNRRFPKYPSSLGRQVVDHNRKWRS 998
            .|||:..|::.      .:|..||                            ||.:.::.|.:..
Zfish   302 ASGALYCGQWK------YDKKHGQ----------------------------GRYIFENGRVYEG 332

  Fly   999 LFNNFESDLANCTASTSSSGGNQSAGTLRKSSKPTLSTAQIWNCIAVYMSKQRAREGTKPGNYFN 1063
            .|:.                                      :|:|.:.:......|        
Zfish   333 EFSK--------------------------------------DCMAEFPAFTPGLSG-------- 351

  Fly  1064 NILLSLPLPQKTSSPLAKARTTTSA-------LSKLQT------EAASALDFLGFPPRRIQSQEA 1115
               ::.|.|.:..|....::::::|       :..:||      ||....:|.       |.:.|
Zfish   352 ---ITTPFPDENDSSKGASQSSSNASPLGSDMVLNIQTLLNRVSEAHREQEFK-------QVEFA 406

  Fly  1116 LNSKPGGLQRADSLI-SMGHNTSRDLDNSSLASFQLDQSLMNSTVNGDESSTFNESFSKLS-HNN 1178
            :....|.|:...|.. |:||..|.| ....|...|..:.|::..|: ....|..:.:|.:: |:.
Zfish   407 VLRHMGLLREIYSFYSSLGHEQSLD-KIFPLTHLQFSRFLLDCRVH-QHGVTLAQIYSLINVHSP 469

  Fly  1179 NNS------------ISKHMNNIDCSITSTTSTTSAVLDQVPSFGMALVLTEQDV----TSIRLY 1227
            ..:            |:.|:.:.|  |.|:.:..:|...:         |.:|::    .|::.:
Zfish   470 FTAILPRECISYIIIIAYHICHKD--IESSNNILAACFSK---------LMKQNIIPNAKSVKGH 523

  Fly  1228 LEQAFKDRHHPLYVLNERIANCFHYSYGYWKVKPTPILAKQAMREWESISRRIYRFVRKMFPALP 1292
            |      ..||::.     |...:||...|::       .||:.|..|:      |..:.|..:.
Zfish   524 L------FCHPVHA-----AVAMNYSDKSWEI-------YQALCEAHSV------FTVRQFVLML 564

  Fly  1293 EELCQMEGS---REVISHITLLYPLVLSEGIYSTL-----FVLYANKYSRKDEMYRQNLNLAEKL 1349
            ::||..:..   .::|..:::..| .:.:|.||.|     |:          |.:...|..|| |
Zfish   565 KDLCLYDNELTVSKLIRTLSVDSP-AIHDGTYSNLDLEMSFL----------EFFEALLGCAE-L 617

  Fly  1350 KDQELVELMGHESFLHNVMLDPKFVESVQTL-KELQEKFSP 1389
            |.|::      :|: .....|....:.:.:| ||.:::.||
Zfish   618 KGQKI------QSY-DESQTDASLQDHISSLSKEKEQRQSP 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Als2NP_649347.1 ATS1 <238..>367 CDD:444065
PH-like 616..715 CDD:473070 12/59 (20%)
COG4642 <745..890 CDD:443680 46/171 (27%)
PLN03185 835..>962 CDD:215619 32/158 (20%)
VPS9 1373..1479 CDD:460489 5/18 (28%)
rsph10bNP_001070227.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 14/64 (22%)
COG4642 84..336 CDD:443680 67/312 (21%)
MORN 1 86..108 6/26 (23%)
MORN 2 109..131 6/21 (29%)
MORN 3 132..154 8/26 (31%)
MORN 4 155..177 7/21 (33%)
MORN 5 179..201 2/21 (10%)
MORN 6 204..226 9/22 (41%)
MORN 7 227..249 8/24 (33%)
MORN 8 251..273 3/21 (14%)
MORN 9 284..306 6/28 (21%)
MORN 10 307..329 6/55 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 353..377 4/23 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 709..731
Blue background indicates that the domain is not in the aligned region.

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