Protein Alignment Als2 and rcc1l

DIOPT Version :10

• Sequence 1: NP_649347.1
• Gene: Als2 / 40410
• FlyBaseID: FBgn0037116
• Length: 1486
• Species: Drosophila melanogaster
• Sequence 2: NP_001076272.1
• Gene: rcc1l / 555972
• ZFINID: ZDB-GENE-060526-370
• Length: 451
• Species: Danio rerio
• Alignment Length: 267
• Identity: 53/267 - (19%)
• Similarity: 93/267 - (34%)
• Gaps: 104/267 - (38%)

  Fly   129 PLELHAEGVRIRRVCC---------SAQGVVFVGASGETYVMGSCG------EVFKAEQQPRHMR 178
            || |:.:..|:.:|.|         .::||..:|::    ..|.||      ||:...    |:.
Zfish   154 PL-LNPQETRVPQVSCGRAHSLVLTDSEGVFSMGSN----TFGQCGRKIVEDEVYSGS----HVV 209

  Fly   179 LYEEG--KELLDLAAGNEHFVMLVAPYNLADDALQLSVASAKEEPEDERASVKSISSGHSERSVA 241
            ...||  ..::.:|.|.:|.:.|.                       :|.||
Zfish   210 HKIEGFDSRVIQVACGQDHSLFLT-----------------------DRGSV------------- 238

  Fly   242 ANTRHLLHQGYALLHTQLFTFGASNNGLLGSGDHIRRANV----------MRLQKLDSMGVCSIA 296
                              |..|...:|..|.|.| .:|:.          :.:|::.:.|.||:|
Zfish   239 ------------------FACGWGADGQTGLGHH-NKASCPVPVGGDLAGVTVQQVATYGDCSLA 284

  Fly   297 AGLEHTVARTLDGRLYHWGLNNHSQLGEDVSSPMEITITENTAALPIEQNSAL-EATCGDYHTLL 360
            .        :.||:::.||.:.:.||    :|..|.|...:...||::....: :|.||.....:
Zfish   285 V--------STDGQVFGWGNSEYLQL----ASVTESTQISSPRLLPLKGVGRIRQAACGGTQVAV 337

  Fly   361 LNASGQI 367
            ||..|.:
Zfish   338 LNEDGDV 344

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Als2	NP_649347.1	ATS1	<238..>367	CDD:444065	29/139 (21%)
		PH-like	616..715	CDD:473070
		COG4642	<745..890	CDD:443680
		PLN03185	835..>962	CDD:215619
		VPS9	1373..1479	CDD:460489
rcc1l	NP_001076272.1	RCC1	52..108	CDD:395335
		ATS1	100..449	CDD:444065	53/267 (20%)