DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Als2 and jph3

Sequence 1:NP_649347.1 Gene:Als2 FlyBaseID:FBgn0037116 Length:1486 Species:Drosophila melanogaster
Sequence 2:XP_017949016.1 Gene:jph3 XenbaseID:XB-GENE-987974 Length:755 Species:Xenopus tropicalis

Alignment Length:507 Identity:114/508 (22%)
Similarity:185/508 (36%) Gaps:131/508 (26%)


  Fly   760 YPDGSVYCGELQHGIIEGFGKMVIPT-TGLYVGNFKGGRFHGHGVYEMHCKDSPESEVYEGNFCE 823
            :.||..|||..|.|...|.|....|. .|.|.|::..| |...|||..     |....|:|.:.:
 Frog     9 FDDGGSYCGGWQDGKAHGHGICTGPKGQGEYAGSWSHG-FEVLGVYTW-----PSGNTYQGTWAQ 67

  Fly   824 GLFHGHGVMRNNRYIYVGEYQANARSGYGVIEDLVSGDKYMGMFADNKRSGIGSCITNRGDYFEG 888
            |..||.||....:::|.||:....:..|||.|...:|.||.|.:::..:.|.|:...:.|..::|
 Frog    68 GKRHGLGVESKGKWVYRGEWTHGFKGRYGVRECTGNGAKYEGTWSNGLQDGYGTETYSDGGTYQG 132

  Fly   889 SFSGDDLTGSGV---------AVFEN----------DYYYEGELTLLGPNGRGEYYMPSGDAC-- 932
            .::.....|.||         ||..:          ..:..|  |.|.|:.          :|  
 Frog   133 QWAAGIRHGYGVRQSVPYGMAAVIRSPLRTSINSLRSEHTNG--TALHPDA----------SCTV 185

  Fly   933 GGSGAMGTGEF----DDTCELIGNKMFG-----QLSGTWDTVRIQAGELVLNRRFPKYPSSLGRQ 988
            .||.|:..|.|    ....|::.||..|     .|||             |..|..:..|||..|
 Frog   186 SGSPAVSRGGFVLMAHSDAEILKNKKKGIFRRSILSG-------------LKLRKSESKSSLASQ 237

  Fly   989 VVDHNRKWRSLFNNFESDLANCTASTSSSGGNQSAGTLRKSSKPTLSTAQI-WNCIAVYMSK--- 1049
                    ||..::|.|:....|.|:::|..|.:.......::.::....| .....|||.:   
 Frog   238 --------RSKQSSFRSEAGMSTVSSTASDINSTISLGEGETELSVIEDDIDATTTEVYMGEWKH 294

  Fly  1050 ---------QRA----------------------REGTK-PGNYFNNILLSLPLPQKTSSPLAKA 1082
                     ||:                      .:||| .|.|.:|:|:|  ..:|...||   
 Frog   295 DKRSGFGVSQRSDGLKYEGEWANNKRHGYGCMTFPDGTKEEGKYKHNVLVS--GKRKNLIPL--- 354

  Fly  1083 RTTTSALSKLQTEAASALDFLGFPPRRIQSQEALNSKPGGLQRADSLISMGHNTSRDLDNSSLAS 1147
                 ..||::.:...|:|         :::...|.   ..|:|:...|...::....|.::.|:
 Frog   355 -----RASKIREKVDRAVD---------EAERVCNI---AKQKAEIAASRTSHSRAKADAAATAA 402

  Fly  1148 FQLDQSLMNSTVNGDESSTFNESFSKLSHNNNNSISKHMNNIDCSITSTTST 1199
            .:..:....:.::..|   |:.||....:.......||.|:.|.....:|.|
 Frog   403 LKAQEEAQIARISAKE---FSPSFQHRENGLKCQRPKHQNSSDDIEVISTET 451

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Als2NP_649347.1 RCC1 258..304 CDD:278826
RCC1_2 292..321 CDD:290274
RCC1 308..361 CDD:278826
PH-like 616..715 CDD:302622
VPS9 1373..1479 CDD:280383
jph3XP_017949016.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG4642
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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